DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBMXL3 and bol

DIOPT Version :10

Sequence 1:NP_001138818.1 Gene:RBMXL3 / 139804 HGNCID:26859 Length:1067 Species:Homo sapiens
Sequence 2:NP_001261614.1 Gene:bol / 39049 FlyBaseID:FBgn0011206 Length:233 Species:Drosophila melanogaster


Alignment Length:233 Identity:53/233 - (22%)
Similarity:82/233 - (35%) Gaps:61/233 - (26%)


- Green bases have known domain annotations that are detailed below.


Human     7 PEKLFIGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARDMNG 71
            |.::|:||::..|.|..|...|..||.:....::.|| ...|:|:.|||||:..:|:..      
  Fly    32 PNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEAQRL------ 89

Human    72 KYLDGKAIMVAQ---TIKPAFKSS----------------RWVPPTPGSG-SRSRFSHRT----- 111
             ..||:.:::..   .|.||.|..                ...||.|.|. ...:|:...     
  Fly    90 -QADGECVVLRDRKLNIAPAIKKQPNPLQSIVATNGAVYYTTTPPAPISNIPMDQFAAAVYPPVT 153

Human   112 --RGGGSSPQRPPSQGRPDDGRGYAGYFDLWPYRAPMPRKRGPPPRHWASPPHKRATPSSLAHSV 174
              ...|.....|||      ...|..::..  |..||     ..|..|  |.:.:...|.|.|| 
  Fly   154 DFTAAGVPAIYPPS------AMQYQPFYQY--YSVPM-----NVPTIW--PQNYQENHSPLLHS- 202

Human   175 GCGMRGKAPTVSGQDGYSGLQPRR--WAGPPHKRAVPR 210
                    ||.:....:|...|:.  |:....:..:||
  Fly   203 --------PTSNPHSPHSQSHPQSPCWSIEDLRDTLPR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBMXL3NP_001138818.1 RRM_RBMX_like 7..86 CDD:409816 22/81 (27%)
PABP-1234 <10..206 CDD:130689 50/224 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..131 10/64 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..175 9/30 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..305
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 357..1067
bolNP_001261614.1 RRM_DAZL_BOULE 31..111 CDD:409846 25/86 (29%)
PABP-1234 <45..219 CDD:130689 45/205 (22%)
Blue background indicates that the domain is not in the aligned region.

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