DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GAB3 and gab3

DIOPT Version :10

Sequence 1:XP_011529405.1 Gene:GAB3 / 139716 HGNCID:17515 Length:611 Species:Homo sapiens
Sequence 2:XP_002931829.2 Gene:gab3 / 100486768 XenbaseID:XB-GENE-948841 Length:582 Species:Xenopus tropicalis


Alignment Length:604 Identity:349/604 - (57%)
Similarity:431/604 - (71%) Gaps:39/604 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSAGDAVCTGWLVKSPPERKLQRYAWRKRWFVLRRGRMSGNPDVLEYYRNKHSSKPIRVIDLSEC 65
            ||:||.||||||:|||||:||:||.||:|||||||||||||||||||||||:|.||||||||::|
 Frog     1 MSSGDVVCTGWLIKSPPEKKLKRYIWRRRWFVLRRGRMSGNPDVLEYYRNKNSKKPIRVIDLNDC 65

Human    66 AVWKHVGPSFVRKEFQNNFVFIVKTTSRTFYLVAKTEQEMQVWVHSISQVCNLGHLEDGAADSME 130
            .|.|::|.:.::|||:|:|||||||..|||||||:||:|||.||::|:|:||.|.|||| .||:|
 Frog    66 EVQKYIGVNLIKKEFENSFVFIVKTIQRTFYLVARTEEEMQSWVNNITQICNFGQLEDG-TDSVE 129

Human   131 SLSYTPSSLQPSSASSLLTAHAASSSLPRDDPNTNAVATEETRSESELLFLPDYLVLSNCETGRL 195
            |||:|.||:|.|.|.|..|:.....|...|..:.: :.:||.|||||.:|:||||.|||||:|:|
 Frog   130 SLSHTNSSVQASPAVSTHTSRITDPSFSVDSASAD-ITSEENRSESESIFIPDYLFLSNCESGKL 193

Human   196 HHTSLPTRCDSWSNSDRSLEQASFDDVFVDCLQPLPSSHLVHPSCHGSGAQEVPSSRPQAALIWS 260
            :    ..|||:||||::||||.|.||||:|.:|   |.|..:.:..|.....  ::.|.|:||..
 Frog   194 N----SARCDAWSNSEKSLEQTSTDDVFLDSVQ---SQHSHNQTLFGVNPNH--NNMPPASLIMV 249

Human   261 REI--NGPPRDHLSSSPLLESSLSSTIQVDKNQGSLPCGAKELDIMSNTPPPRPPKPSHLSERRQ 323
            :::  ||...|..||||||..|:..|..||....|      :.:::..|||||||||:|.||.|.
 Frog   250 KDLDSNGSSSDFSSSSPLLGPSVPQTFSVDYTIIS------DGEVLPITPPPRPPKPNHFSEGRP 308

Human   324 EEWS---THSGSKKPECTLVPRRISLSGLDNMRTWKADVEGQSLRHRDKRLSLNLPCRFSPMYPT 385
            |..|   ..:|...|  .:||||||||.|||:|.|:.::|..|||.|||||||||| ||:|:|..
 Frog   309 EVISIGNLQNGHFFP--GMVPRRISLSSLDNVRNWRGELEDWSLRTRDKRLSLNLP-RFAPLYSL 370

Human   386 ASASIEDSYVPMSPQAGASGLGPHCSPDDYIPMN------------SGSISSPLPELPANLEPPP 438
            .|.|.|||||||:|.|........||.|.||||:            :..:||||||||.:|||||
 Frog   371 TSESSEDSYVPMNPNASPPASESDCSTDGYIPMSPVTAAFPFQSPVNSKVSSPLPELPTDLEPPP 435

Human   439 VNRDLKPQRKSRPPPLDLRNLSIIREHASLTRTRTVPCSRTSFLSPERNGINSARFFANPVSRED 503
            |||||||:||.|||||||||||.|||||.|||..|||.:||||.|||.:.||||..|:.....||
 Frog   436 VNRDLKPRRKMRPPPLDLRNLSTIREHAPLTRMWTVPYNRTSFTSPESDCINSAGIFSGSGFGED 500

Human   504 EESYIEMEEHRTASSLSSGALTWTKKFSLDYLALDFNSASPAPMQQKLLLSEEQRVDYVQVDEQK 568
             .:||:| |||..:|..:|:..|.:||:|||||||||||||:|:|:|..||||||||||||||:|
 Frog   501 -VTYIQM-EHRQGTSPVNGSFPWPRKFNLDYLALDFNSASPSPVQKKPFLSEEQRVDYVQVDEKK 563

Human   569 TQALQSTKQEWTDERQSKV 587
            |||||:|||||||||||||
 Frog   564 TQALQNTKQEWTDERQSKV 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAB3XP_011529405.1 PH_Gab3 1..125 CDD:270184 90/123 (73%)
gab3XP_002931829.2 PH-like 1..125 CDD:473070 91/124 (73%)

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