Protein Alignment ARID3C and retn

DIOPT Version :10

• Sequence 1: XP_047278737.1
• Gene: ARID3C / 138715
• HGNCID: 21209
• Length: 562
• Species: Homo sapiens
• Sequence 2: NP_788434.1
• Gene: retn / 45976
• FlyBaseID: FBgn0004795
• Length: 911
• Species: Drosophila melanogaster
• Alignment Length: 505
• Identity: 170/505 - (33%)
• Similarity: 222/505 - (43%)
• Gaps: 179/505 - (35%)

Human    49 SGRSHRGLSPCAPPALPRSGPAPAAAASSAASERTAARGAQGGGSAPPGPSRGQGRLGGGRSKGS 113
            :|.|:.|            |..|..:::|.|:       ..|||:|.||.:.|.|..|||...|.
  Fly   181 NGSSYNG------------GTTPTNSSNSNAT-------TNGGGTAGPGGTGGSGGGGGGGGGGG 226

Human   114 AVETPGAAGHARQAALSSGSRLVPGTPSAGGLRLEAVMEALQKQQAARLAQGVGPLAPACPLLPP 178
            .    |..||  |.:.:|        |:|
  Fly   227 G----GVGGH--QFSFAS--------PTA------------------------------------ 241

Human   179 QPPLPDHRTLQAPEGALGNVGAEEEEDAEEDEEKREEAGAEEEAAEESRPGAQGPSSPSSQPPGL 243
                       ||.|                :|.|..|     |...|.......:|.|||
  Fly   242 -----------APSG----------------KEARHFA-----ANSASNSSTSSEASNSSQ---- 270

Human   244 HPHEWTYEEQFK---QLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVT 305
            ..:.|::|||||   ||||::.|||||||||||||||||||||:||:|||||.|||||.|:.||.
  Fly   271 QNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVI 335

Human   306 AKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGELQAAIDSN 370
            |:||||:|||:|:|:|:.:||.||::||||||||||||||||||||||.:.||:|.|||||||.|
  Fly   336 ARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGN 400

Human   371 RREGRRQAYTATPLFGLAGPPPRGAQDPALGPGPAPPATQSS-PGPAQGSTSGLPAHACAQLSPS 434
            ||||||.:|              |..:......|..|.::.| ||..|            |:||
  Fly   401 RREGRRSSY--------------GQYEAMHNQMPMTPISRPSLPGGMQ------------QMSP- 438

Human   435 PIKKEESGIPNPCLALPVGLALGPTREKLAPEEPPEKRAVLMGPMDPPRPCMPPSFLPRGKVPLR 499
                         |||....|:...::..|..........|||         .|:|   |::|
  Fly   439 -------------LALVTHAAVANNQQAQAAAAAAAAHHRLMG---------APAF---GQMP-- 476

Human   500 EERLDGPLNLAGSGISSINMALEINGVVYTGVLFARR-QPVPASQGPTNP 548
                    ||       :...:|...:.|..::.|:: |.:|...|..:|
  Fly   477 --------NL-------VKQEIESRMMEYLQLIQAKKEQGMPPVLGGNHP 511

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ARID3C	XP_047278737.1	ARID_ARID3C	251..377	CDD:350644	98/128 (77%)
retn	NP_788434.1	ARID_Dri-like	277..401	CDD:350645	92/123 (75%)