DRSC/TRiP Functional Genomics Resources

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Protein Alignment ARID3C and sol1

DIOPT Version :9

Sequence 1:NP_001017363.1 Gene:ARID3C / 138715 HGNCID:21209 Length:412 Species:Homo sapiens
Sequence 2:NP_595529.1 Gene:sol1 / 2540318 PomBaseID:SPBC30B4.04c Length:865 Species:Schizosaccharomyces pombe


Alignment Length:394 Identity:87/394 - (22%)
Similarity:147/394 - (37%) Gaps:87/394 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    15 GVGPLAPACPLLPPQPPLPDHRTLQAPEGALGNVGAEEEEDAEEDEEKREEAGAEEEAAEESRPG 79
            |.|.:..:.|:: |...:|..   |..|.|:..   ::::..::...:|:....|...:::..|.
pombe    96 GSGSVKYSSPMM-PSSRIPFQ---QEKEAAMQQ---QQQQQQQQQLYQRQMQSREALLSQQIPPN 153

Human    80 ----------------AQGPSSPSSQPPGLHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQ 128
                            |..|::||.....|.|   .|...|            .:|:..|.|||:
pombe   154 QIGINAHPAVRQTPQPAPSPNTPSGNANQLTP---AYAASF------------DKFMVSLISFME 203

Human   129 KRGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQY 193
            |||||:...|.:....::|..|:.||...||..:|.....|.:::..|..|   :..|.:|..||
pombe   204 KRGTPIKSYPQINNTPINLMMLYALVMRAGGSRQVSAHNFWPKISASLGFP---SPDAISLLIQY 265

Human   194 M-KYLYPYECETRALSSPGELQAAIDSNRREGRRQAYTATPLFGLAGPPPRGAQDPALGPGPAPP 257
            . .||.|||            :|.:.:.:::...|...|.....:...|....|.|......|..
pombe   266 YNSYLLPYE------------EAWLAAQQQQKSLQQAKANHSANVQSRPKNYPQKPVQTTPEAVH 318

Human   258 ATQS--------SPGPAQGSTSGLPAHACAQLSPSPIKKEESGIPNPCLALPVGLALGPTREKLA 314
            |..|        ||.||..:....||      :|:.:..|.:..|.|.         .|||    
pombe   319 ANGSMHGSLHSKSPSPAFTANRFSPA------APTTVSSERNAPPYPS---------APTR---- 364

Human   315 PEEPPEKRAVLMGPMDPPRPCMPPSFLPRGKVPLREERLDGPLNLAGS-GISSINMALEINGVVY 378
            |..|..:.:....|:|...|.   ::.|. |.|: :..|..|||:|.: .:....:.|::..:|.
pombe   365 PTPPTVQTSSSAAPVDSAEPV---AYQPI-KKPI-DPMLGYPLNVAATYRLDESLLRLQMPSIVD 424

Human   379 TGVL 382
            .|.:
pombe   425 LGTV 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARID3CNP_001017363.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..96 16/96 (17%)
ARID 101..227 CDD:355778 32/126 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..278 12/53 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..412
sol1NP_595529.1 BRIGHT 189..277 CDD:128777 31/114 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 58 1.000 Domainoid score I3481
eggNOG 1 0.900 - - E1_KOG2744
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001099
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1374
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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