DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Epn2 and lqfR

DIOPT Version :9

Sequence 1:NP_001349514.1 Gene:Epn2 / 13855 MGIID:1333766 Length:652 Species:Mus musculus
Sequence 2:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster


Alignment Length:639 Identity:165/639 - (25%)
Similarity:276/639 - (43%) Gaps:146/639 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 QMKNIVNNYSEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVAFSEIMSMVWKR-LNDHGKNWR 72
            ::.|:|.||:|.|.||||||::|||||:..||.|:|..|::...|.|:|||:||| |.|:..|||
  Fly    17 KVTNVVMNYTETEGKVREATNDDPWGPTGPLMQELAYSTFSYETFPEVMSMLWKRMLQDNKTNWR 81

Mouse    73 HVYKALTLLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQGINVREKSKQLVALLKDE 137
            ..||:|.||:||::.|||||....||:|:.:::|:::.:.|..|||||||||.|.::|:..::|:
  Fly    82 RTYKSLLLLNYLVRNGSERVVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHKVRELIDFIQDD 146

Mouse   138 ERLKVERVQALKTKER---MAQVATGV---GSNQITFGRGSSQPNLSTSYSEQEYGKAGGSPASY 196
            :||:.||.:|.|.|::   |:..|.|:   |.:..:.|.|..... |..|::.:|..:.|.  ::
  Fly   147 DRLREERKKAKKNKDKYIGMSSDAMGMRSGGYSGYSGGSGGGGGG-SGGYNDGDYRSSRGD--NW 208

Mouse   197 HGSPEASL-----CPQHRTGAMLGQSEELQPLSQRHPCLPHLGLASHPNGDWAQPCLTCDRAARA 256
            :....|..     ...|..|...| |:...|..:|          ::...|            ||
  Fly   209 YSDKSADKDRYEDDDTHYDGEREG-SDSDSPSPRR----------NYRYND------------RA 250

Mouse   257 TSPRVSSELEQARPQTSGEEELQLQL-ALAMSREVAEQSSESVQTARGSKEERLRRGDDLRLQMA 320
            :...|:||   |:|.:     |.:.: :..:|..|::|.:.:........::::..|........
  Fly   251 SPAEVASE---AKPSS-----LNMNIRSKTVSSPVSKQPTSTASAKPALSQKKIDLGAAANFGKP 307

Mouse   321 L--------EESRRDTVKVPKKKEAKACCKP------GSHSQQTTLLDLMDAL---PSSGPVTQK 368
            .        ..:.|||   |...:......|      .:::.|:...||:|.|   .|..|..:|
  Fly   308 APGGAAGIHSPTHRDT---PTSVDLMGGASPSPSTSKANNNTQSNNNDLLDDLFKTCSPPPGQEK 369

Mouse   369 T--------------EPWSAGASANQ----TNPWGGTVAPSNITDPWPSFGTKPAASVDPW---- 411
            |              .|.::.||..:    .:.:|...|.|.|::| ||.|..|||: |.:    
  Fly   370 TLNSAAVIVDDDDDFNPRASDASQQEFGDFASAFGQPSAGSTISEP-PSTGLVPAAN-DEFADFA 432

Mouse   412 ---GVPTTAST-------QSVPKNSDPWAASQQPASNAGKTTDAWGAAKPSSASGSFELFSNFNG 466
               |..|:.|.       .:.|.|......:..|.|.|..||    |....:..|...:..:...
  Fly   433 AFQGSTTSTSALDGNLLKTATPANDSFDLFNSAPTSTAAATT----ATDLLAGLGDLSIHQSMPM 493

Mouse   467 TVKDDFSEFDNLRTSKKPAESGASVPPQDSRTTS--------PDLFESQSLTSA----------- 512
            .|::..:..::..:|..|.      ||.::...:        .||.:.||.::.           
  Fly   494 AVEEQLASSNDSMSSASPQ------PPSEAMRLAFSKAQKQLRDLMQVQSASAVAQVAAILGELH 552

Mouse   513 SSKPSSARKTPESFLGPN--------------AALVN-LDSLVTKPAP-PAQSL 550
            :|.......|||..:|.:              |||:| |..|.::..| |:|.:
  Fly   553 NSNALPGFTTPEQLVGLDRQTCDWTCLAHGEYAALLNQLTELFSQDWPEPSQDV 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Epn2NP_001349514.1 ENTH_Epsin 19..141 CDD:340787 61/122 (50%)
lqfRNP_732736.2 ENTH_epsin 27..150 CDD:239627 61/122 (50%)
DUF4045 <226..459 CDD:289995 52/268 (19%)
Telomere_reg-2 1072..1184 CDD:287202
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2102
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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