DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Epn1 and lqfR

DIOPT Version :9

Sequence 1:XP_036008550.1 Gene:Epn1 / 13854 MGIID:1333763 Length:654 Species:Mus musculus
Sequence 2:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster


Alignment Length:598 Identity:164/598 - (27%)
Similarity:257/598 - (42%) Gaps:101/598 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse    85 LRRQMKNIVHNYSEAEIKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKR-LNDHGK 148
            |..::.|:|.||:|.|.||||||::|||||:..||.|:|..|::...|.|:|||:||| |.|:..
  Fly    14 LADKVTNVVMNYTETEGKVREATNDDPWGPTGPLMQELAYSTFSYETFPEVMSMLWKRMLQDNKT 78

Mouse   149 NWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREKAKQLVALL 213
            |||..||::.|:.||::.|||||....:|::|.:::|:::.:.|..|||||:|||.|.::|:..:
  Fly    79 NWRRTYKSLLLLNYLVRNGSERVVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHKVRELIDFI 143

Mouse   214 RDEDRLREERAHALKTKEK---LAQTA-----------TASSAAVGSGPPPEAEQAWPQSSGEEE 264
            :|:|||||||..|.|.|:|   ::..|           :..|...|.|.....:..:..|.|:. 
  Fly   144 QDDDRLREERKKAKKNKDKYIGMSSDAMGMRSGGYSGYSGGSGGGGGGSGGYNDGDYRSSRGDN- 207

Mouse   265 LQLQLALAMSKEEADQPPSCGPEDDVQLQLALSLSREEHDKEERIRRGDDLRLQMAIEESKRETG 329
                   ..|.:.||:...  .:||.........|..:.....|..|.:|       ..|..|..
  Fly   208 -------WYSDKSADKDRY--EDDDTHYDGEREGSDSDSPSPRRNYRYND-------RASPAEVA 256

Mouse   330 GKEESSLMDLADVFTTPAPPQASDPWGGPASVPT----AVPVAAAASDPWGGPA----------- 379
            .:.:.|.:::.....|.:.|.:..|....::.|.    .:.:.|||:  :|.||           
  Fly   257 SEAKPSSLNMNIRSKTVSSPVSKQPTSTASAKPALSQKKIDLGAAAN--FGKPAPGGAAGIHSPT 319

Mouse   380 ---VPPAADPWGGAAPTPASGDP-WRPAAPTGPSVDPWGGTPAPAAGEGPTPDPWG----SSDGG 436
               .|.:.|..|||:|:|::... ....:.....:|....|.:|..|:..|.:...    ..|..
  Fly   320 HRDTPTSVDLMGGASPSPSTSKANNNTQSNNNDLLDDLFKTCSPPPGQEKTLNSAAVIVDDDDDF 384

Mouse   437 APVSGPPSSDPWAP-APAFSDPWGGSP-AKPSSNGTAVGGFDTEPDEFSDFDRLRTALPTSGSST 499
            .|.:...|...:.. |.||..|..||. ::|.|.|..    ....|||:||    .|...|.:||
  Fly   385 NPRASDASQQEFGDFASAFGQPSAGSTISEPPSTGLV----PAANDEFADF----AAFQGSTTST 441

Mouse   500 GELE--LLAGEVPARSPGAFDMSGVGGSLAESVGSPPPAATPTPTPPTRKTPESFLGPNAALVDL 562
            ..|:  ||....||..  :||:.           :..|.:|...|..|...        |.|.||
  Fly   442 SALDGNLLKTATPAND--SFDLF-----------NSAPTSTAAATTATDLL--------AGLGDL 485

Mouse   563 DSLVSRPGPTPPGSKASNPFLPSGAP-PTGPSVTNPFQPAPPATLTLNQLR----LSPVPPVPG- 621
            ....|.|........:||..:.|.:| |...::...|..|......|.|::    ::.|..:.| 
  Fly   486 SIHQSMPMAVEEQLASSNDSMSSASPQPPSEAMRLAFSKAQKQLRDLMQVQSASAVAQVAAILGE 550

Mouse   622 -----APPTYISP 629
                 |.|.:.:|
  Fly   551 LHNSNALPGFTTP 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Epn1XP_036008550.1 ENTH_Epsin 98..221 CDD:340787 59/123 (48%)
PRK07764 <349..516 CDD:236090 47/193 (24%)
lqfRNP_732736.2 ENTH_epsin 27..150 CDD:239627 58/122 (48%)
DUF4045 <226..459 CDD:289995 55/251 (22%)
Telomere_reg-2 1072..1184 CDD:287202
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2102
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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