DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eomes and Doc2

DIOPT Version :9

Sequence 1:NP_034266.2 Gene:Eomes / 13813 MGIID:1201683 Length:707 Species:Mus musculus
Sequence 2:NP_648282.1 Gene:Doc2 / 39038 FlyBaseID:FBgn0035956 Length:469 Species:Drosophila melanogaster


Alignment Length:455 Identity:145/455 - (31%)
Similarity:209/455 - (45%) Gaps:87/455 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse   262 VPGSGFRAHVYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNINGLNPTAHYNVFVEVVLADP 326
            :||    ..:.|.|..||.:||:..|||||||.||||||.:..:::||...::|.|.:|:|....
  Fly    53 LPG----VEMTLQNDDLWKQFHQIGTEMIITKSGRRMFPSMRLSVSGLEDESNYCVLLEMVPIGD 113

Mouse   327 NHWRFQGGKWVTCGKADNNMQGNKMYVHPESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQMIV 391
            ..::|.|.:||..|.|: .....:||:||:||.||:||..|.|.|.|:|||||   ..:|:..||
  Fly   114 CRYKFSGSQWVPAGGAE-PQSPQRMYLHPDSPATGAHWQAQPILFNKVKLTNN---TLDNSGHIV 174

Mouse   392 LQSLHKYQPRLHIVEVTEDGVEDLNE-P-SKTQTFTFSETQFIAVTAYQNTDITQLKIDHNPFAK 454
            |.|:||||||||::...     ||.: | :..|.|.|:||:|:|||||||..||:||||:|||||
  Fly   175 LASMHKYQPRLHVIRTA-----DLAQIPWAPQQAFVFAETEFVAVTAYQNDRITKLKIDNNPFAK 234

Mouse   455 GFRDNYDSMYTASENDRLTPSPT--DSPRSHQIVPGGRYGVQNFFPEPFVNTLPQARYYNGERTV 517
            |||:...|..    ..:::.|||  |..:|..:.........:..|     |........|..::
  Fly   235 GFRETGQSRC----KRKMSSSPTGEDQDQSPSLSHSQSQSESDMSP-----TKGGGETAGGTSSI 290

Mouse   518 PQTNGLLSPQQSEEVANPPQRWLVTPVQQ---PVTNKLDIGS-------------YESEYTSSTL 566
            ..::|   ||.....:|.....|.:.:..   |..:.|.:||             .::...||..
  Fly   291 GDSDG---PQIKRLRSNGSACSLSSSLDDQSVPGASSLALGSPPPHLHSHSHPHPLQARSASSVF 352

Mouse   567 LPY---GIKSL--PLQTSHALGYY-----------PDPTFPAMAGWGGRGAYQRKMAAGL-PWTS 614
            :.:   .::||  |.....|..|:           ..|.:|..|          .:.||| |...
  Fly   353 MQHFQQNMQSLLRPSLVDLACTYFGRPHEYGGAIQASPMYPPAA----------MLQAGLGPHPG 407

Mouse   615 RMSPP-VFPEDQLAKEKVKEEISSSWIETPPSIKSLD--SSDSGVYNSACKRKRLSPSTPSNGNS 676
            ...|| |...|.::.|...||:            .||  |..|.:..|..::....|||.|.|.|
  Fly   408 LNLPPGVSGADLISDESGAEEL------------ELDVGSETSTLEQSTQEQPLEQPSTRSKGFS 460

Mouse   677  676
              Fly   461  460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EomesNP_034266.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..125
TBOX 269..462 CDD:238106 93/194 (48%)
T-box_assoc 484..705 CDD:292794 44/229 (19%)
Required for transcription activation. /evidence=ECO:0000250 592..707 23/89 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 642..689 11/37 (30%)
Doc2NP_648282.1 TBOX 55..242 CDD:238106 94/199 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.