DRSC/TRiP Functional Genomics Resources

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Protein Alignment Emx2 and ro

DIOPT Version :10

Sequence 1:NP_034262.2 Gene:Emx2 / 13797 MGIID:95388 Length:253 Species:Mus musculus
Sequence 2:NP_524521.1 Gene:ro / 43234 FlyBaseID:FBgn0003267 Length:350 Species:Drosophila melanogaster


Alignment Length:213 Identity:62/213 - (29%)
Similarity:85/213 - (39%) Gaps:67/213 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse    37 SYANSSPINPFLNGFHSAAAAAAAGRGVYSNPDL----------------VFAEAVSHPPNPAVP 85
            ::|:..|  |....:||..       |..|:||:                .:..|..:|.:|:..
  Fly    66 THAHKPP--PCDTPYHSDG-------GSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQ 121

Mouse    86 --------VHP----------VPPPHALAAHPLPSSHSPHPLFASQQRDP---STFYPWLIHRYR 129
                    .||          |.||.|:||....:...||...|....||   :.|..:|..|.|
  Fly   122 HQQHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPHFSAGFSAFLARRRR 186

Mouse   130 YLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSL 194
            ..|                     :.:|.||.||..|.||||..|.:|.|:..:.|.:||.:|.|
  Fly   187 KEG---------------------RQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRL 230

Mouse   195 TETQVKVWFQNRRTKFKR 212
            ||||:|:||||||.|.||
  Fly   231 TETQIKIWFQNRRAKDKR 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Emx2NP_034262.2 Homeodomain 156..212 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..253 62/213 (29%)
roNP_524521.1 Homeodomain 196..248 CDD:459649 28/51 (55%)

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