DRSC/TRiP Functional Genomics Resources

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Protein Alignment Emx2 and abd-A

DIOPT Version :10

Sequence 1:NP_034262.2 Gene:Emx2 / 13797 MGIID:95388 Length:253 Species:Mus musculus
Sequence 2:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster


Alignment Length:188 Identity:54/188 - (28%)
Similarity:81/188 - (43%) Gaps:47/188 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse    53 SAAAAAAAGR-GVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRD 116
            ||.:||:||. ||.|     ...|.:.|.:..:|.........:|..|.                
  Fly   325 SAVSAASAGAIGVDS-----LGNACTQPASGVMPGAGGAGGAGIADLPR---------------- 368

Mouse   117 PSTFYPWLIHRYRYLGHRFQ----GNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKN 177
                |||:. ...::|..|:    |:...|      |...|  :|.|..::..|.|.||..|..|
  Fly   369 ----YPWMT-LTDWMGSPFERVVCGDFNGP------NGCPR--RRGRQTYTRFQTLELEKEFHFN 420

Mouse   178 HYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ-----KLEEEG---SDSQQKKK 227
            ||:....|.::||:|.|||.|:|:||||||.|.|::     ::.|:.   .:.|:|.|
  Fly   421 HYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMK 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Emx2NP_034262.2 Homeodomain 156..212 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..253 4/23 (17%)
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 26/55 (47%)
Abdominal-A 456..478 CDD:403567 3/21 (14%)

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