DRSC/TRiP Functional Genomics Resources

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Protein Alignment Emx2 and Antp

DIOPT Version :10

Sequence 1:NP_034262.2 Gene:Emx2 / 13797 MGIID:95388 Length:253 Species:Mus musculus
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:264 Identity:66/264 - (25%)
Similarity:98/264 - (37%) Gaps:68/264 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 QPAPKRCFTIESLVAKDSPLPASRSEDPIRPAA------------LSYANSSPINPFLNGFHSAA 55
            |.||::.......|.:....|..:.:.|:..|:            :....|.|:...::|.|..|
  Fly   129 QQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMSGHHMNA 193

Mouse    56 ----------AAAAAGRGVYSNPDLVFAEAVSH-----------PPNPAVP---VHP-VPPPHAL 95
                      ..|..|......||:.......|           ||..|.|   :|. ..||...
  Fly   194 QMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQGMMHQGQGPPQMH 258

Mouse    96 AAHP---LPSSHSPHPLFASQQRD-PSTFYPWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPK 156
            ..||   .|.|.:|:    ||... ||..|||:..::                     ...::.|
  Fly   259 QGHPGQHTPPSQNPN----SQSSGMPSPLYPWMRSQF---------------------GKCQERK 298

Mouse   157 RIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLE--EEG 219
            |.|..::..|.|.||..|..|.|:....|.::||:|.|||.|:|:||||||.|:|::...  |.|
  Fly   299 RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTKGEPG 363

Mouse   220 SDSQ 223
            |..:
  Fly   364 SGGE 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Emx2NP_034262.2 Homeodomain 156..212 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..253 3/13 (23%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 32/169 (19%)
Homeodomain 298..354 CDD:459649 26/55 (47%)

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