DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Emx2 and pb

DIOPT Version :10

Sequence 1:NP_034262.2 Gene:Emx2 / 13797 MGIID:95388 Length:253 Species:Mus musculus
Sequence 2:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster


Alignment Length:259 Identity:75/259 - (28%)
Similarity:107/259 - (41%) Gaps:56/259 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 LVAKDSPLPASRSEDPI-------------RPAALSYANS-SPINPFLNGFHSAAAAAAAGRGVY 65
            :|.|.:|....||.|..             :|:...:.|. ||.:|.:.   :...:.|.| ||.
  Fly    74 MVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIG---TPVGSGAIG-GVG 134

Mouse    66 SNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHR--Y 128
            .|.::.....|.:|    |.|.|..|                     ...|....|||:..:  .
  Fly   135 VNVNVNVGVGVGYP----VGVVPQTP---------------------DGMDSVPEYPWMKEKKTS 174

Mouse   129 RYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLS 193
            |...:.....|.|...|:..|.|   |:|:|||::.:|||.||..|..|.|:....|.::|.||.
  Fly   175 RKSSNNNNQGDNSITEFVPENGL---PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLD 236

Mouse   194 LTETQVKVWFQNRRTKFKRQKL----EEEGSDSQQKKKGTHHINRWRIATKQASPEEIDVTSDD 253
            |||.||||||||||.|.|||.|    :|:..||.:........|    :..:.|.:..::.|||
  Fly   237 LTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSN----SNSKKSCQGCELPSDD 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Emx2NP_034262.2 Homeodomain 156..212 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..253 8/43 (19%)
pbNP_476669.3 Homeodomain 199..255 CDD:459649 30/55 (55%)

Return to query results.
Submit another query.