DRSC/TRiP Functional Genomics Resources

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Protein Alignment Emx2 and cad

DIOPT Version :10

Sequence 1:NP_034262.2 Gene:Emx2 / 13797 MGIID:95388 Length:253 Species:Mus musculus
Sequence 2:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster


Alignment Length:257 Identity:63/257 - (24%)
Similarity:100/257 - (38%) Gaps:51/257 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    37 SYANSSPINPFLNGFHSAAAAAAAGRG-------------VYSNPDLVFAEAVSHPP-------- 80
            |.:..:|..|.||..:|:.....||.|             ...|.....||.:..||        
  Fly   126 SSSGGAPGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEI 190

Mouse    81 -NPAVPVHPVPPPHALAAH---------------PLPSSH----SPHPLFASQQRDPS--TFYPW 123
             :|..|.....|.|.||.|               ..||:|    :.:.:..:.:..||  .::.|
  Fly   191 SSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDW 255

Mouse   124 LIHRYRYLGHRFQGNDTSPESFLLHNAL-----ARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGA 183
            : .:..|.........:||....|.:.|     .|...:.|..::..|.|.||..:..:.|:...
  Fly   256 M-KKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIR 319

Mouse   184 ERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQASPE 245
            .:.:||.:|||:|.|||:||||||.|.::|  .::|||......|..|.:..::...:|..|
  Fly   320 RKSELAQTLSLSERQVKIWFQNRRAKERKQ--NKKGSDPNVMGVGVQHADYSQLLDAKAKLE 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Emx2NP_034262.2 Homeodomain 156..212 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..253 8/33 (24%)
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 22/54 (41%)

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