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Protein Alignment Emx2 and bsh

DIOPT Version :10

Sequence 1:	NP_034262.2	Gene:	Emx2 / 13797	MGIID:	95388	Length:	253	Species:	Mus musculus
Sequence 2:	NP_477350.2	Gene:	bsh / 35266	FlyBaseID:	FBgn0000529	Length:	429	Species:	Drosophila melanogaster

Alignment Length:	250	Identity:	65/250 - (26%)
Similarity:	83/250 - (33%)	Gaps:	78/250 - (31%)

- Green bases have known domain annotations that are detailed below.

Mouse    23 PASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAAGRGVYSNP---------------DLVF 72
            |:..|..|......|.:.|:......|...|..|....|:.::|.|               |.:.
  Fly   102 PSQHSHPPQSHPPASASASATATARSNQAASGYAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQIS 166

Mouse    73 AE----AVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGH 133
            .:    |..|||.|.....|.|||               ||...........||    ...|..|
  Fly   167 QQLGSGAAQHPPVPTTQPQPPPPP---------------PLNGGSGASNGVLYP----NAPYTDH 212

Mouse   134 RF-----------QGNDTSPESFLLH----------------------------NALAR-KPKRI 158
            .|           .|...|.:.:.|.                            |||.. :.::.
  Fly   213 GFLQMTLGYLSPSSGTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMGVNALRHCRRRKA 277

Mouse   159 RTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQ 213
            ||.||..||..||..||...|:...||.:||.:|.|:|||||.||||||.|.|:|
  Fly   278 RTVFSDPQLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQ 332

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.