DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PXDNL and cysu

DIOPT Version :9

Sequence 1:NP_653252.4 Gene:PXDNL / 137902 HGNCID:26359 Length:1463 Species:Homo sapiens
Sequence 2:NP_650627.1 Gene:cysu / 42100 FlyBaseID:FBgn0038511 Length:753 Species:Drosophila melanogaster


Alignment Length:747 Identity:250/747 - (33%)
Similarity:355/747 - (47%) Gaps:147/747 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   608 DFVESSILDAVQRVDSAINSTRRHLFSQKPHTSSDLLAQFHYPRDPLIVEMARAGE-IFEHTLQL 671
            |.:.::.|||.:|:         |:...|    ||...:          |:|..|| :.:.::||
  Fly    71 DAINAAYLDARKRI---------HVAQPK----SDWKPE----------ELATVGELLLDISIQL 112

Human   672 IR------ERVKQGL-TVDLEGKEFRYNDLVSPRSLSLIANLSGCTARRPLPNCSNRCFHAKYRA 729
            .|      |.:::|| |:|              .|.:||..:  |    |.......|...|||.
  Fly   113 ARTYGLSYEEIEKGLPTID--------------TSKTLIREV--C----PPFFAGVECRPGKYRR 157

Human   730 HDGTCNNLQQPTWGAALTAFARLLQPAYRDGIRAPRGLGLPVGSRQPLPPPRLVATVWARAAAVT 794
            .||.|||::.||||||...|.||:.|.|.|||.|||   :.|..|. ||..|:|      :..:.
  Fly   158 FDGLCNNIEHPTWGAANAPFQRLIGPLYSDGINAPR---ISVTGRD-LPFSRVV------SRTMH 212

Human   795 P-----DHSYTRMLMHWGWFLEHDLDHTVPALSTARFSDGRPCSSVCTNDP-PCF--PMNTRHAD 851
            |     ||:.|.|::.||.|::||...|           |.|...:..||| .|.  |::.:|..
  Fly   213 PDDGFHDHAGTVMVIAWGQFMDHDFTLT-----------GTPLDPINRNDPEECCKRPLHLKHPY 266

Human   852 PRGTHAP------------CMLFARSSPACASGRPSATVDSVYAREQINQQTAYIDGSNVYGSSE 904
            ......|            |:.|.|..|   |.||...:.|   |:|.|..|..||.:.|||..|
  Fly   267 CNEIRIPDDDYFYRLFNVKCIDFVRGFP---SPRPGCKLGS---RQQFNTLTGVIDANTVYGVKE 325

Human   905 RESQALRDPSVPRGLLKTGFPWPPSG-KPLLPFSTGPPTE-CARQEQESPCFLAGDHRANEHLAL 967
            ..::.||  :...||::....:...| |.|||.....|.| |.|..:...||..|:.|.||.|.|
  Fly   326 SFARKLR--TGYGGLMRMNPVFQEYGLKDLLPLKLDIPDEGCTRPNKSMYCFEGGEIRVNEQLVL 388

Human   968 AAMHTLWFREHNRMATELSALNPHWEGNTVYQEARKIVGAELQHITYSHWLPKVLGDP-----GT 1027
            ..||||..|||||:||.|:.:|.||:..|::||||:|..|.:||:|::.:||.:||..     |.
  Fly   389 TCMHTLMAREHNRLATALAQINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLGKEVMEKFGL 453

Human  1028 RMLR-GY-RGYNPNVNAGIINSFATAAFRFGHTLINPILYRLNATLGEISEGHLPFHKALFS--- 1087
            .:.: || .||:..||.|||:|||.|||||||:|:...:.|.:..           ||.:.|   
  Fly   454 VLQKDGYWDGYDSTVNPGIIDSFAGAAFRFGHSLLPTAVERWSKA-----------HKFIASKRL 507

Human  1088 ------PSRIIKEGGIDPVLRGLFGVAAKWRAPSYLLSPELTQRLFSAAYSA-AVDSAATIIQRG 1145
                  |..:.:.|.:|....||....|  :|....::.|:|..||....:. .:|..:..:|||
  Fly   508 SDLIRRPYDLYRAGVLDEYFMGLMNQVA--QAMDDSITQEVTNHLFKKEGARFGMDLVSFNMQRG 570

Human  1146 RDHGIPPYVDFRVFCNLTSVKNFEDLQNEIKDSEIRQKLRKLYGS----PGDIDLWPALMVEDLI 1206
            |:.|||.|::||.||.|.:...::::...:.:..:   ||  |||    |.|||||...:.|..:
  Fly   571 REFGIPGYMEFRKFCGLPTSNTWDEMYGSMPNETV---LR--YGSIFEHPADIDLWSGGVSEKSL 630

Human  1207 PGTRVGPTLMCLFVTQFQRLRDGDRFWYE---NPGVFTPAQLTQLKQASLSRVLCDNGDSIQQVQ 1268
            ||:.:|||..|:..||...||.|||||||   .|..|||.||.::::|.|||::|||.|.|..||
  Fly   631 PGSMLGPTFACVIATQMSYLRRGDRFWYELPNQPSSFTPEQLQEIRKAKLSRLICDNTDLIDTVQ 695

Human  1269 ADVFVKAEY---PQDYLNCSEIPKVDLRVWQD 1297
            ....|..::   |:.......||.:||..|.|
  Fly   696 IYPMVLPDHEINPRVPCKSGIIPSIDLTKWAD 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PXDNLNP_653252.4 LRR 1 51..72
leucine-rich repeat 52..85 CDD:275378
LRR_8 53..134 CDD:316378
LRR 2 75..96
leucine-rich repeat 86..123 CDD:275378
LRR 3 99..120
LRR_8 123..182 CDD:316378
LRR 4 123..144
leucine-rich repeat 124..147 CDD:275378
LRR 5 147..168
leucine-rich repeat 148..171 CDD:275378
leucine-rich repeat 172..184 CDD:275378
LRRCT 180..232 CDD:214507
Ig_3 234..309 CDD:316449
Ig_3 329..402 CDD:316449
Ig 432..505 CDD:325142
Ig 528..596 CDD:325142
peroxidasin_like 851..1286 CDD:188658 167/475 (35%)
VWC 1400..1450 CDD:214564
cysuNP_650627.1 An_peroxidase 155..692 CDD:281139 211/583 (36%)
peroxinectin_like 305..687 CDD:188655 150/401 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165150033
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

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