DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PXDNL and Irc

DIOPT Version :9

Sequence 1:NP_653252.4 Gene:PXDNL / 137902 HGNCID:26359 Length:1463 Species:Homo sapiens
Sequence 2:NP_001262653.1 Gene:Irc / 42049 FlyBaseID:FBgn0038465 Length:697 Species:Drosophila melanogaster


Alignment Length:803 Identity:199/803 - (24%)
Similarity:318/803 - (39%) Gaps:202/803 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   577 RYECVARNSFGLAVTNMFLTVTAIQGRQAGDDFVESSILDA---VQRVDSAINSTRRHLFSQKPH 638
            :|.|:.....|.::      :|.|....:.|...|.:.:.|   :|.|::|::|..|....:...
  Fly     5 QYICLLAFIIGASL------LTTIDANSSRDVNAELNRIPASKWLQYVETALDSVNRQKRLEDNL 63

Human   639 TSSDLLAQFHYPRDPLIVEMARAGEIFEH-----TLQLIRERVKQGLTVD-LEGKEFRYNDLVSP 697
            ..||:              ..:.|.: .|     ||..:..:....|.:. |:.....:|....|
  Fly    64 LGSDI--------------TVKNGSL-SHAQLLDTLPSLASKKDNKLALKILKSSLLVFNSECLP 113

Human   698 RSLSLIANLSGCTAR-----RPLPNCSN---RCFHAKYRAHDGTCNNLQQPTWGAALTAFARLLQ 754
            .      |:.|...|     :|||..|:   .|.::.....:|.             .||.|||.
  Fly   114 N------NIDGDKCRSYLEQKPLPEGSSLRTECENSLKGNREGH-------------YAFRRLLG 159

Human   755 PA-YRDGI--RAPRGLGLPVGSRQPLPPPRLVATVWARAAAV-TPDH-----------SYTRMLM 804
            .: ||:|.  ..|..     |.|:.:|      ..|:.:..: .|||           :....|.
  Fly   160 SSHYRNGFYQMFPNS-----GRRETVP------AAWSISKELYEPDHIQISKQQTFESNSNLALP 213

Human   805 HWGWFLEHDLDHTVPALSTARFSDGRPCSSVCTND----------PPCFPMNTRHADPRGTH--A 857
            .|..|:||||...|    :...|:|.|. ..|:.|          |.|.|:..:   |.|.:  .
  Fly   214 QWAQFVEHDLSKPV----SQSMSNGAPI-ECCSRDQINLQPRHHHPACAPILYQ---PGGKYDVP 270

Human   858 PCMLFARSSPA---CASGRPSATVDSVYAREQINQQTAYIDGSNVYG---SSERESQALRDPSVP 916
            .|:.:.||:.|   |..|          ..||:||.|..:|.|.:||   ::||:.:.|..    
  Fly   271 SCLNYVRSALAVADCNFG----------GAEQLNQATGSLDLSQLYGFTAAAERKLRVLEG---- 321

Human   917 RGLLKTGFPWPPSGK---PLLPFSTGP--PTECARQE-QESPCFLAGDHRANEHLALAAMHTLWF 975
             |||::    .|.|:   .|||.:|..  |:.|||.. .:..||.|||.|.|.......::|::.
  Fly   322 -GLLRS----TPRGEFDNALLPIATDTEGPSFCARATIGDGTCFAAGDSRVNSSPFSILIYTIFM 381

Human   976 REHNRMATELSALNPHWEGNTVYQEARKIVGAELQHITYSHWLPKVLGDPGTRMLRGYRGYNPNV 1040
            |.||::|.||...||.|....::|.|:.:.....:.:....|||:|||.   :|....|...||.
  Fly   382 RNHNKVAAELKQRNPRWSDEKLFQAAKAVNVDIYRRVVIEEWLPEVLGQ---KMSSEIRRKQPNR 443

Human  1041 NAGIINSFATAAFRFGHTLINPILYRLNATLGEISEG------------HLPFHKALFSPSRIIK 1093
            ...:.|.||.||.||..:::...|  ||.|...:..|            .|| .|.||.    :|
  Fly   444 ALEVSNEFAVAAIRFYFSMLPNEL--LNLTKDNVVYGTEKNNQYVFISKELP-TKNLFE----LK 501

Human  1094 EGGIDPVLRGLFGVAAKWRAPSY-----------LLSPELTQRLFSAAYSAAV-----------D 1136
            |....|.|:             |           ||:.| |.:: .||||..|           |
  Fly   502 EEIYKPKLQ-------------YTSQKLNNILESLLNQE-TMKM-DAAYSGGVVWHKDTKPTHAD 551

Human  1137 SAATIIQRGRDHGIPPYVDFRVFCNLT-SVKNFEDLQNEIKDSEIRQKLRKLYGSPGDIDLWPAL 1200
            ..|..||||||||:.||..:...|.|: .|::::|.::.| .|::..||:.:|.|..|:||....
  Fly   552 ILAFDIQRGRDHGLLPYYRYLESCVLSRPVESWKDFEHFI-PSDVLDKLKTIYASWADVDLIVGG 615

Human  1201 MVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLT-QLKQASLSRVLCDNGDSI 1264
            :.|:.:.|: :|||..|:...||..:...:    :...|....:|. |.:..:.:::||.| ..:
  Fly   616 ISENPVHGS-IGPTFSCIISEQFVHVLKQN----QQKAVQKHTELVEQYRHFNGTKLLCLN-SGL 674

Human  1265 QQVQADVFVKAEYPQDYLNCSEI 1287
            ..|..::|.........::|.::
  Fly   675 SAVPQNIFQLPSARNQMVSCEDV 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PXDNLNP_653252.4 LRR 1 51..72
leucine-rich repeat 52..85 CDD:275378
LRR_8 53..134 CDD:316378
LRR 2 75..96
leucine-rich repeat 86..123 CDD:275378
LRR 3 99..120
LRR_8 123..182 CDD:316378
LRR 4 123..144
leucine-rich repeat 124..147 CDD:275378
LRR 5 147..168
leucine-rich repeat 148..171 CDD:275378
leucine-rich repeat 172..184 CDD:275378
LRRCT 180..232 CDD:214507
Ig_3 234..309 CDD:316449
Ig_3 329..402 CDD:316449
Ig 432..505 CDD:325142
Ig 528..596 CDD:325142 3/18 (17%)
peroxidasin_like 851..1286 CDD:188658 135/484 (28%)
VWC 1400..1450 CDD:214564
IrcNP_001262653.1 An_peroxidase 151..672 CDD:281139 164/603 (27%)
An_peroxidase_like 290..637 CDD:265428 116/382 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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