DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adgre1 and mthl1

DIOPT Version :10

Sequence 1:NP_034260.1 Gene:Adgre1 / 13733 MGIID:106912 Length:931 Species:Mus musculus
Sequence 2:NP_573140.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster


Alignment Length:383 Identity:87/383 - (22%)
Similarity:155/383 - (40%) Gaps:76/383 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse   579 YTLQHIQPKQKSERPICVSWNTDVEDGRWTPSGCEIVEASETHTVCSCNRMANLAIIMASGELTM 643
            |.|:|.|.:.:.:...|....:       :.:|..|.:.|...|:...|.. ||...:.:|    
  Fly   282 YCLEHTQREGEVKIIACQHLFS-------SAAGAGIHDGSIGGTIEQANGQ-NLQKAVLTG---- 334

Mouse   644 EFSLYIISHVGTVISLVCLALAIATFLLCRAVQNHNTYMHLHLC--VCLFLAKILFLTGIDKTDN 706
                      |.::|:|.|:..:....|..|| :|..:....:|  .||...|||.  .|::..:
  Fly   335 ----------GILVSIVFLSATLVAGFLLPAV-HHALHWRCQICYVTCLLFGKILL--AIEELSS 386

Mouse   707 -----QTACAIIAGFLHYLFLACFFWMLVEAVMLFLMVRNLKVVNYFSSRNIKMLH---LCAFGY 763
                 ..||..:|..:.:.|||.|||:......::...|:.:..:.  .||.:.|.   ...:.:
  Fly   387 SLQPGSAACHTLAITMQFFFLAAFFWLNTMCFNIWWTFRDFRPSSL--ERNQEALRRYLYSLYAW 449

Mouse   764 GLPVLVVIISASV---------QPRGYGMHNRCWLNTETGFIWS-FLGPVCMIITINSVLLAWTL 818
            |.|:|:..::|.|         :| |:| ...||.:.....|:: |.||:.:::..|..|...| 
  Fly   450 GGPLLITFVAACVDQLPETTLLRP-GFG-QLYCWFDNRNLSIFAYFYGPIGLLLCANIALFVST- 511

Mouse   819 WVLRQKLCSV--SSEVSKLKDTRLLTFKAIAQIFILGCSWVLGIFQI---GPLASIMAYLFT-II 877
              ..|..|.:  ..:|....:...|....:..:.::|.:|:..|...   ||..   .:.|| :|
  Fly   512 --THQLTCGLWKRDDVKSSSEKSALGRVCLKLVVVMGVTWIADILSWLVGGPHG---VWFFTDLI 571

Mouse   878 NSLQGAFIFL-IHCLLNRQVRDEYKKL--------LTRKTDLSSHSQTSGILLSSMPS 926
            |:|||.|||: :.|  ..||....:::        :|..|:...||.:|    ..:||
  Fly   572 NALQGVFIFIVVGC--QPQVWTACRRIFCPRLRHDITNTTNGVQHSSSS----QGLPS 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgre1NP_034260.1 EGF_CA 33..63 CDD:238011
EGF_CA 81..115 CDD:214542
EGF_CA 133..172 CDD:214542
EGF_CA 173..>203 CDD:214542
EGF_CA 222..258 CDD:238011
EGF_CA 272..>301 CDD:214542
EGF_CA 319..352 CDD:214542
Cell attachment site. /evidence=ECO:0000255 506..508
GPS 591..640 CDD:197639 8/48 (17%)
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 595..642 9/46 (20%)
7tmB2_EMR 644..906 CDD:320555 67/296 (23%)
TM helix 1 646..671 CDD:320555 4/24 (17%)
TM helix 2 680..702 CDD:320555 6/23 (26%)
TM helix 3 711..738 CDD:320555 7/26 (27%)
TM helix 4 755..775 CDD:320555 4/22 (18%)
TM helix 5 792..815 CDD:320555 6/23 (26%)
TM helix 6 839..864 CDD:320555 4/27 (15%)
TM helix 7 868..893 CDD:320555 11/26 (42%)
mthl1NP_573140.1 7tmB3_Methuselah-like 326..598 CDD:410632 70/300 (23%)
TM helix 1 327..352 CDD:410632 6/38 (16%)
TM helix 2 362..384 CDD:410632 7/23 (30%)
TM helix 3 396..423 CDD:410632 7/26 (27%)
TM helix 4 441..461 CDD:410632 3/19 (16%)
TM helix 5 485..515 CDD:410632 7/32 (22%)
TM helix 6 530..557 CDD:410632 4/26 (15%)
TM helix 7 562..587 CDD:410632 11/29 (38%)
Blue background indicates that the domain is not in the aligned region.

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