DRSC/TRiP Functional Genomics Resources

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Protein Alignment Elk1 and Ets97D

DIOPT Version :9

Sequence 1:NP_031948.4 Gene:Elk1 / 13712 MGIID:101833 Length:429 Species:Mus musculus
Sequence 2:NP_001263000.1 Gene:Ets97D / 43236 FlyBaseID:FBgn0004510 Length:484 Species:Drosophila melanogaster


Alignment Length:97 Identity:51/97 - (52%)
Similarity:65/97 - (67%) Gaps:13/97 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MDPS------------VTLWQFLLQLLREQGNGHIISWTSRDGGEFKLVDAEEVARLWGLRKNKT 53
            |:||            |.||||||::|.:..:..:|.|...: |||||.|.:.||||||.:|||.
  Fly   330 MNPSNYTTIGSGNNGQVQLWQFLLEILTDCEHTDVIEWVGTE-GEFKLTDPDRVARLWGEKKNKP 393

Mouse    54 NMNYDKLSRALRYYYDKNIIRKVSGQKFVYKF 85
            .|||:|||||||||||.::|.||||::|.|||
  Fly   394 AMNYEKLSRALRYYYDGDMISKVSGKRFAYKF 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elk1NP_031948.4 ETS 4..89 CDD:197710 49/94 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..146
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..204
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..253
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..354
Sufficient for interaction with MAD2L2. /evidence=ECO:0000250|UniProtKB:P19419 350..400
Ets97DNP_001263000.1 GABP-alpha 48..123 CDD:288472
SAM_PNT-GABP-alpha 184..272 CDD:176084
ETS 345..429 CDD:197710 48/82 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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