DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elf1 and Ets65A

DIOPT Version :9

Sequence 1:NP_001273340.1 Gene:Elf1 / 13709 MGIID:107180 Length:612 Species:Mus musculus
Sequence 2:NP_001303373.1 Gene:Ets65A / 38700 FlyBaseID:FBgn0005658 Length:728 Species:Drosophila melanogaster


Alignment Length:526 Identity:132/526 - (25%)
Similarity:193/526 - (36%) Gaps:156/526 - (29%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MAAVVQQNDL------VFEFASNGMEDEQ--QLGDPAIFPAVIVEHVPGADILNSYAGLACVEEP 57
            :|.|:..|.:      |...:.||::..:  .|..|:.....:.:|    .::.|.||       
  Fly   117 VAGVLNYNAVSSSTAGVLSSSGNGVQRHRLDTLQPPSGCSPAVTQH----GVITSSAG------- 170

Mouse    58 NDMITESSLD-VAEEEIIDDDDDDITLTVEASCH-----NGDETIETIEAAEALLNIDSPSPPVL 116
              .:|..:|| |:....:.      :||..:|.|     ..|::  |::.|....:..:||.   
  Fly   171 --QVTSGTLDAVSAAPALP------SLTASSSSHVEHKVRADKS--TLDCATTSSHAAAPSS--- 222

Mouse   117 DEKQINNNIFSSSEDDIVAPITHVSVTLDGIPEVMETQQVQETNADSPGAS-------------- 167
                      |||..|      |....:.|       .:...|:....|||              
  Fly   223 ----------SSSASD------HQQGRISG-------SKSSNTSGTGGGASASGGGGSALYSSYK 264

Mouse   168 ----------SPEQRKRKKGRKTKP----PRPD-----SPTTTPNISVKKKNKDGKGNTIYLWEF 213
                      |........|.|..|    .:||     .||::      :....|.|. |.||:|
  Fly   265 SSWGSHSSTQSQGYSSNALGIKHDPHSQLRQPDPYQMFGPTSS------RLASSGSGQ-IQLWQF 322

Mouse   214 LLALLQD--KATCPKYIKWTQREKGIFKLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGI 276
            ||.||.|  .|:|   |.| :...|.|||.|...|:|.||:.|:||:|||:.:.|||||||.:.|
  Fly   323 LLELLSDSNNASC---ITW-EGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNI 383

Mouse   277 LAKVEGQRLVYQF-------KEMPKDLIYIDDEDPSSSIESSDQSLS----STTASSRNQANRSR 330
            :.||.|:|..|:|       ...|.      ..||:...: ||..::    |...||....:...
  Fly   384 MTKVHGKRYAYKFDFQGLAAATQPA------ASDPTYKYQ-SDLFMTPYHHSAKLSSFMSPHHGM 441

Mouse   331 VSSSPGIKGGAATILKPGN--SKAANPKDPVEVGQPSEVLRTVQPSQAPYPTQLFRTVHVVQPVQ 393
            .|||..|...||:.   ||  |.|.|...|..:..       |.||            ||...:.
  Fly   442 TSSSASIFPSAASW---GNWGSPATNLYQPHSMSH-------VTPS------------HVAPHLS 484

Mouse   394 AVPEEATIAST----MQEEAANSSVPSIRTIQASTQVPV--VVSPGNQQLHTVTVPLTTVIASID 452
            :.|..|..:|:    ..|..|.:|...|....|||.|.:  |...|......|:..:.:. :|..
  Fly   485 SYPHYAXPSSSGGAFXYESNAIASASGIGGGTASTGVGIGGVGGAGGGGGSGVSTGVGST-SSST 548

Mouse   453 PSSGAG 458
            .|||||
  Fly   549 TSSGAG 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elf1NP_001273340.1 Elf-1_N 2..111 CDD:372034 23/122 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..199 12/75 (16%)
ETS 207..289 CDD:197710 41/83 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..361 19/66 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 562..586
Ets65ANP_001303373.1 ETS 316..401 CDD:197710 42/89 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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