DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elf1 and aop

DIOPT Version :9

Sequence 1:NP_001273340.1 Gene:Elf1 / 13709 MGIID:107180 Length:612 Species:Mus musculus
Sequence 2:NP_001259908.1 Gene:aop / 33392 FlyBaseID:FBgn0000097 Length:732 Species:Drosophila melanogaster


Alignment Length:587 Identity:137/587 - (23%)
Similarity:204/587 - (34%) Gaps:190/587 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse    87 ASCHNGDETIETIEAA-------EALLNIDSPSP---PVLDE------KQINNNIFSSSEDDIVA 135
            ||.::.|...|..|.:       .|.|:..:.||   |:|.:      :|:.|:..:|..     
  Fly   253 ASSNHSDSEEEYSETSGGVSKMPPAPLSYSTASPPGTPILKDIKPNWTQQLTNSFVNSWS----- 312

Mouse   136 PITHVSVTLDGIPEVMETQQVQETNADSPGASSPEQRKRKKGRK------------------TKP 182
                         :..:.||.|:..|.:..|:..:|.:.::.::                  |..
  Fly   313 -------------QQQQQQQQQQAAAVAAVAAQAQQHQLQQQQQQQQLPQKLTLDNTAGPVVTPA 364

Mouse   183 PRPDSPTTTPNISVKKK------NKDGKGNTIYLWEFLLALLQDKATCPKY---IKWTQREKGIF 238
            ....|..|||:...|.|      |.:...|...||:||..||.|:.  .||   |.|..|:.|:|
  Fly   365 GGSISAPTTPSYMYKAKREFFPENSEPNTNGRLLWDFLQQLLNDRN--QKYSDLIAWKCRDTGVF 427

Mouse   239 KLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKDLIYIDDED 303
            |:||...:::|||..||...|||:.|.|||||||:..||.||:|:|..|||...|.:|       
  Fly   428 KIVDPAGLAKLWGIQKNHLSMNYDKMSRALRYYYRVNILRKVQGERHCYQFLRNPTEL------- 485

Mouse   304 PSSSIESSDQSLSSTTASSRNQANRSRVSSSPGIKGGAATILKPGNSKAAN-------------P 355
              .:|::......||.|:..        ..||.:..|::.  .||:....|             |
  Fly   486 --KNIKNISLLRQSTPANGN--------GGSPSMPQGSSQ--APGSPAGQNWNPQQQSQQQQQSP 538

Mouse   356 KDPVEVGQP------SEVLRTVQPSQAPYPTQ-LFR-----TVHVVQPVQAVPEEATIASTMQEE 408
            :.|.....|      :.|......:..|.||. ||.     ..|.:....|.|            
  Fly   539 QRPASRNGPMSLPAVAAVAAAAAAAYGPPPTSPLFMHAINGAFHYLSAAAAGP------------ 591

Mouse   409 AANSSVPSIRTIQASTQVPVVVSPGNQQLHTVTVPLTTVIASIDPSSGAGSQKFILQTIPSSQPM 473
            ..||  |::.|..|      |..|...|.|    ||     .::..||:||:             
  Fly   592 PPNS--PALNTPSA------VGGPDKFQFH----PL-----KLENGSGSGSE------------- 626

Mouse   474 TVLKENVMLQSQKPGSPSIVLSPTQV----QQVLTSNVQS---ICNGAGSVASAPSFSATTPVVT 531
                           |....|.||.:    :...|||...   |.|..|         .||..:.
  Fly   627 ---------------SAGEDLKPTDLSVSSKSTATSNEDCYPLIRNADG---------LTTIKLI 667

Mouse   532 FSRSSQLVAHPPGTVITSVIKAQETKTLKQEVEKKAEDDLNEDAEKSAQQPQPYVMVLSSSNGFS 596
            .....|:.|.|.|         |..|...|:.............:::::|.|| |.:.|..||..
  Fly   668 RYNEHQVAASPAG---------QSPKHDDQQAGASNASSSPRPMDQASEQAQP-VPMESDCNGGE 722

Mouse   597 SQ 598
            |:
  Fly   723 SE 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elf1NP_001273340.1 Elf-1_N 2..111 CDD:372034 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..199 10/60 (17%)
ETS 207..289 CDD:197710 40/84 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..361 12/73 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 562..586 3/23 (13%)
aopNP_001259908.1 SAM_PNT-Tel_Yan 49..116 CDD:176085
ETS 395..482 CDD:197710 42/88 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3804
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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