DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egr4 and odd

DIOPT Version :9

Sequence 1:NP_065621.1 Gene:Egr4 / 13656 MGIID:99252 Length:478 Species:Mus musculus
Sequence 2:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster


Alignment Length:114 Identity:41/114 - (35%)
Similarity:53/114 - (46%) Gaps:3/114 - (2%)


- Green bases have known domain annotations that are detailed below.


Mouse   342 SFPAAKARRKGRRGGKCSARCFCPRPHVKAFACPVESCVRSFARSDELNRHLRIHTGHKPFQCRI 406
            :.|..|....|...|..|......||. |.|.|  :.|.|.|.:|..|..|.|.||..:|:.|.|
  Fly   191 AMPTLKLGGAGGASGVPSGATGSSRPK-KQFIC--KYCNRQFTKSYNLLIHERTHTDERPYSCDI 252

Mouse   407 CLRNFSRSDHLTTHVRTHTGEKPFACDVCGRRFARSDEKKRHSKVHLKQ 455
            |.:.|.|.|||..|...|:.:|||.|..||:.|.:|.....|...||::
  Fly   253 CGKAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQSRTLAVHKVTHLEE 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Egr4NP_065621.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..302
zf-C2H2 372..396 CDD:278523 9/23 (39%)
C2H2 Zn finger 374..396 CDD:275368 8/21 (38%)
zf-H2C2_2 388..413 CDD:290200 10/24 (42%)
COG5048 400..>458 CDD:227381 22/56 (39%)
C2H2 Zn finger 404..424 CDD:275368 9/19 (47%)
zf-H2C2_2 416..441 CDD:290200 11/24 (46%)
C2H2 Zn finger 432..452 CDD:275368 6/19 (32%)
oddNP_722922.1 COG5048 <203..334 CDD:227381 38/102 (37%)
C2H2 Zn finger 222..242 CDD:275368 8/21 (38%)
zf-H2C2_2 234..259 CDD:290200 10/24 (42%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
zf-H2C2_2 262..285 CDD:290200 10/22 (45%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
zf-C2H2 304..326 CDD:278523
C2H2 Zn finger 306..326 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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