DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egr4 and cbt

DIOPT Version :9

Sequence 1:NP_065621.1 Gene:Egr4 / 13656 MGIID:99252 Length:478 Species:Mus musculus
Sequence 2:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster


Alignment Length:351 Identity:91/351 - (25%)
Similarity:131/351 - (37%) Gaps:89/351 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse   170 PQLSPPDVKPGLR------APPASPALD------------------AAASAFKGPYAPWELLSAG 210
            |:::.|:.||.|.      .||....||                  |.:|:.:      :..|:.
  Fly    66 PEIAVPNKKPRLEQPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVSSSSQ------DENSSS 124

Mouse   211 VPGNCGSQGSFQTTPEARFSAVGTKVEDLLSISCPAELPGPAARLYQAGAYDTFSLAPGDLGEGT 275
            ....|.|..:..|:.    |:|...|||        :.|       :|..:..............
  Fly   125 STSCCSSSSNTNTST----SSVPPTVED--------DYP-------EANVWRNLKFKMNRKRAAE 170

Mouse   276 EGLPALLTP--PGGEGGSGGEGGEFLAAPPAQ------------LSPLGLRGAATADFSKPLVAD 326
            ..||.:.||  |..:          |..|||.            |:|:.:...|::.....|:  
  Fly   171 VALPPVQTPETPVAK----------LVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILL-- 223

Mouse   327 LPGGSGVAAPSSPAASFPAAKARRKGRRGGKCSARCFCPR---PHVKAFACPVESCVRSFARSDE 388
                |.|||..||.   |..|.......  |.:.|....:   ...:.:.|....|.:::.:|..
  Fly   224 ----STVAAQQSPT---PVPKTPTMSEE--KLTTRITAAQAAATRSRIYECSFPDCGKNYFKSSH 279

Mouse   389 LNRHLRIHTGHKPFQCR--ICLRNFSRSDHLTTHVRTHTGEKPFACDVCGRRFARSDEKKRHSKV 451
            |..|.|:|||.:||.|:  .|.:.|||||.|:.|.|||||||.|.|.||.::|.|||...:|.|.
  Fly   280 LKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKR 344

Mouse   452 HLKQKARAEERLKGLGFYSLGLSFAA 477
            |.|.||....|...|...:...|.||
  Fly   345 HNKDKANGVNRHVSLANNNTSASVAA 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Egr4NP_065621.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..302 6/28 (21%)
zf-C2H2 372..396 CDD:278523 6/23 (26%)
C2H2 Zn finger 374..396 CDD:275368 6/21 (29%)
zf-H2C2_2 388..413 CDD:290200 11/26 (42%)
COG5048 400..>458 CDD:227381 31/59 (53%)
C2H2 Zn finger 404..424 CDD:275368 10/21 (48%)
zf-H2C2_2 416..441 CDD:290200 14/24 (58%)
C2H2 Zn finger 432..452 CDD:275368 9/19 (47%)
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 6/23 (26%)
C2H2 Zn finger 265..287 CDD:275368 6/21 (29%)
COG5048 <270..362 CDD:227381 42/91 (46%)
zf-H2C2_2 279..306 CDD:290200 11/26 (42%)
C2H2 Zn finger 295..317 CDD:275368 10/21 (48%)
zf-H2C2_2 309..332 CDD:290200 13/22 (59%)
zf-C2H2 323..345 CDD:278523 10/21 (48%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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