DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egr1 and odd

DIOPT Version :9

Sequence 1:NP_031939.1 Gene:Egr1 / 13653 MGIID:95295 Length:533 Species:Mus musculus
Sequence 2:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster


Alignment Length:221 Identity:56/221 - (25%)
Similarity:83/221 - (37%) Gaps:70/221 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse   322 YPNRPSKTPPHERPYACPVES-------------------------------------------- 342
            :|:.|...|.|.|||...:.|                                            
  Fly   159 HPHHPHPHPHHVRPYPAGLHSLHAAVMGRHFGAMPTLKLGGAGGASGVPSGATGSSRPKKQFICK 223

Mouse   343 -CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA-- 404
             |:|:|::|..|..|.|.||.::|:.|.||.:.|.|.|||..|...|:.:|||.|..||:.|.  
  Fly   224 YCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKDKPFKCSDCGKGFCQS 288

Mouse   405 ----------------------RSDERKRHTKIHLRQKDKKADKSVVASPAASSLSSYPSPVATS 447
                                  ||..::.:.|.||:...:::.|.||.:.:.::..|.|:. |.|
  Fly   289 RTLAVHKVTHLEEGPHKCPICQRSFNQRANLKSHLQSHSEQSTKEVVVTTSPATSHSVPNQ-ALS 352

Mouse   448 YPSPATTSFPSPVPTSYSSPGSSTYP 473
            .|.|...:...||....||..||..|
  Fly   353 SPQPENLAQHLPVLDLSSSSSSSEKP 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Egr1NP_031939.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94
DUF3446 132..207 CDD:288757
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..237
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..336 5/13 (38%)
zf-C2H2 336..360 CDD:278523 9/68 (13%)
C2H2 Zn finger 338..360 CDD:275368 8/66 (12%)
zf-H2C2_2 352..377 CDD:290200 10/24 (42%)
COG5048 363..>421 CDD:227381 23/81 (28%)
C2H2 Zn finger 368..388 CDD:275368 9/19 (47%)
zf-H2C2_2 380..405 CDD:290200 11/48 (23%)
C2H2 Zn finger 396..416 CDD:275368 7/43 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 407..478 19/67 (28%)
DUF3432 426..520 CDD:288743 16/48 (33%)
BES1_N <441..478 CDD:283367 12/33 (36%)
oddNP_722922.1 COG5048 <203..334 CDD:227381 33/130 (25%)
C2H2 Zn finger 222..242 CDD:275368 7/19 (37%)
zf-H2C2_2 234..259 CDD:290200 10/24 (42%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
zf-H2C2_2 262..285 CDD:290200 10/22 (45%)
C2H2 Zn finger 278..298 CDD:275368 4/19 (21%)
zf-C2H2 304..326 CDD:278523 5/21 (24%)
C2H2 Zn finger 306..326 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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