DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efnb3 and Ephrin

DIOPT Version :9

Sequence 1:XP_006532223.1 Gene:Efnb3 / 13643 MGIID:109196 Length:351 Species:Mus musculus
Sequence 2:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster


Alignment Length:359 Identity:83/359 - (23%)
Similarity:122/359 - (33%) Gaps:113/359 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse    67 DRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPA-PNLLLTCDRPDLDLRFTIKFQE 130
            |::.::|| ...||...:.: |.|.:|.|...:...|....| |.::..||:|...:.|||.|:.
  Fly   249 DQVHIICP-VYEPGTFENET-EKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRP 311

Mouse   131 YSPNLWGHEFRSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVGQSPRGGAVPRKPVSEM 195
            ::|...|.||...:|||.|:||  :::.|....||.|.|..|||:.:|..:|.... ....:|..
  Fly   312 FTPQPGGLEFLPGNDYYFISTS--SKDDLYRRIGGRCSTNNMKVVFKVCCAPEDNN-KTTALSNS 373

Mouse   196 PMERDRGAAHSAEPGRDTIPGDPSSNATSRG----------------------AEGPLPP----- 233
            ....|.|.|.:.     .|..:..|:..|.|                      |..|:.|     
  Fly   374 KSVTDTGGAINV-----NIANNDESHVNSHGNNIAIGTNIGINGGQIIGGPQSAGIPINPLSGNN 433

Mouse   234 -------------------PSMPAVAGAAGGMALLLLGVAGAGGAMCWRRRRAKPSESRHPGPG- 278
                               |..|.:.|...|...:..|:.|.||.:.              .|| 
  Fly   434 NINGIPTTINSNIDQFNRIPIQPNIIGNHVGTNAVGTGIVGGGGIIL--------------TPGH 484

Mouse   279 SFGRGGSLGLGGGGGMGPREAEPG----ELGIALRG------------------GGTADPPFCPH 321
            :.|....|..|.||..|   |.||    :.||.:..                  .|..|.   .|
  Fly   485 AHGNINMLQPGRGGING---AYPGHHHIQTGIRINNVPTQHNYPSHKGNANSNINGNDDH---HH 543

Mouse   322 YEKVSGDYGHPVYIVQD-------GPPQSPPNIY 348
            |.|      ||..:|::       |...|..||:
  Fly   544 YNK------HPNEVVKNEELTYNSGAATSDGNIF 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efnb3XP_006532223.1 Cupredoxin 51..179 CDD:388514 37/112 (33%)
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 37/112 (33%)
PigN <557..>622 CDD:282796 4/15 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843261
Domainoid 1 1.000 75 1.000 Domainoid score I9027
eggNOG 1 0.900 - - E1_KOG3858
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001210
OrthoInspector 1 1.000 - - otm42715
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11304
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4391
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.870

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