DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SVOPL and CG33233

DIOPT Version :9

Sequence 1:NP_001132928.1 Gene:SVOPL / 136306 HGNCID:27034 Length:492 Species:Homo sapiens
Sequence 2:NP_995978.2 Gene:CG33233 / 2769005 FlyBaseID:FBgn0053233 Length:489 Species:Drosophila melanogaster


Alignment Length:520 Identity:110/520 - (21%)
Similarity:199/520 - (38%) Gaps:123/520 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    34 VEDAVETIGFGR-----FHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMV 93
            |:.|:.|||:|.     |.::.|:.|.|  |.|:|....:.|::   .||:.....:..|:...:
  Fly     6 VDTALLTIGYGLGQVIIFMVSFFIYMYS--VTESMTAGYLVVLT---SCEFDTSPKEKTLLANSL 65

Human    94 FFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVG---CGVSGHS 155
            ..|.:...:..|.|||||||..::.::.:....||::::..|.......:|.:||   ..|:...
  Fly    66 LGGMVASGLFIGFLADRYGRKFVIRLALVGALSFSVISALMPDLYSLSVIRIIVGTFLSAVASLQ 130

Human   156 QGLIIKTEFLPTKYRGYMLPL---SQVFWLAGSLLIIGLASVIIPTIG----------------- 200
            .|.:  .||...|:|...:.:   ||           |||.:..|.:.                 
  Fly   131 VGFL--GEFHAIKWRPITVAICSQSQ-----------GLALIYCPLVAMAILPNNFNVDLSSSYN 182

Human   201 ---WRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNRSVMPEGKLVEPV 262
               ||:|:....|||.:.:|....:||:..|.:|......||..|:.:.:|||....:..:.  :
  Fly   183 LRVWRFLMMFFMIPGWLALVGICLVPETPHFLMSVNRPDKALLALKWICRMNRKKWEDVDIT--L 245

Human   263 LEKRGRFAD-------------LLDAK--YLRTTLQIWVIWLGISFAYYGV-----ILASAELLE 307
            .|::....|             ||.:|  ..:..:.:::|: ||.|...|:     ::.:.:...
  Fly   246 SEEKSSTNDQEGFWKTVWYEYKLLFSKPHVFKFFICLFLIF-GIFFTSIGLGIWFPVIRNMDNSG 309

Human   308 RDLVCGSKSDSAVVV------TGGDSGESQ----------SPCY-------CHMFAPSDYRTMII 349
            .:.:|...:::...:      |.|...||.          .|.|       |.:.|     ::::
  Fly   310 SNRLCDLVNNNPTFINHEADDTNGTDSESPKCNDEMTNLIDPVYYGFTYIGCFILA-----SVLV 369

Human   350 STIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNT 414
            ..:....:..|:||....||..|::........:||:|:.:      |.|.|..|...|      
  Fly   370 HWMTRKYVIALHILISMILGISLNIMKQPTVVLIFFVLMMV------LPGVLIPLATSV------ 422

Human   415 VYIYTAEVYPTTMRALGMGTSGSLCRIG-----AMVAPFISQVLMSASILGALCLFSSVCVVCAI 474
                ..:..|..:|...:....||.|.|     .|:..||.........:..|||  ::|||.|:
  Fly   423 ----LVDCLPVNLRGKALCMVRSLARFGGVLGSTMIGLFIRVTCDVTFNIFNLCL--AICVVLAV 481

Human   475  474
              Fly   482  481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SVOPLNP_001132928.1 2A0115 34..454 CDD:273327 103/498 (21%)
MFS 51..480 CDD:119392 103/498 (21%)
CG33233NP_995978.2 MFS_1 22..451 CDD:284993 94/470 (20%)
MFS 23..>208 CDD:119392 45/202 (22%)
MFS 354..>482 CDD:304372 32/151 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153339
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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