DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPB1 and CG8539

DIOPT Version :9

Sequence 1:NP_001862.2 Gene:CPB1 / 1360 HGNCID:2299 Length:417 Species:Homo sapiens
Sequence 2:NP_001261520.1 Gene:CG8539 / 38842 FlyBaseID:FBgn0035791 Length:385 Species:Drosophila melanogaster


Alignment Length:337 Identity:99/337 - (29%)
Similarity:162/337 - (48%) Gaps:22/337 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    92 VLISNLRN-VVEAQFDSRVRATGHSYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIY 155
            ||::.:.| :.||:...|.|......:.|..::.|..:..::|..:...::...:..|:|.||:.
  Fly    10 VLVTIVVNQLSEAREVRRRRGLMLQLDNYLSYDGIMQYLDELALSHSNRVTLKDVARTYENRALK 74

Human   156 LLKV--GKAGQNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLDKLDFYVLPVL 218
            :..:  |.....|..||:|...|:|||::||.....:.:.|..:...   ::||...|::::|:.
  Fly    75 MAIITNGDGRPGKRVIFLDAALHSREWMTPAAALLTIHKLVVEFAEN---SDLLTDYDWHIMPLA 136

Human   219 NIDGYIYTWTKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIG--ASRNPCDETYCGPAAESEK 281
            |.|||.|:....|:||.|| |..|.:|.||:.||||...| .:|  ..::||||.|.|.:..||.
  Fly   137 NPDGYEYSRNTERYWRNTR-TPNGGNCFGTNLNRNFAVDW-NVGFPELKDPCDENYAGSSPFSEV 199

Human   282 ETKALADFIRNKLSSIKA--YLTIHSYSQMMIYPYSYAYKLGENNAELNALAKATVKELASLHGT 344
            |.:.:.|.:...:.|.:|  ||::|:.::.:.||:.|......|..|.:.:.:.....:....||
  Fly   200 EARTVRDIMHGLVESKRAVMYLSLHTANRSVFYPWVYDTDPVSNQKEHDEIGRFVADRILQSTGT 264

Human   345 ---KYTYGPGATTIYPAAGGSDDWAYDQGIRYSFTFELRDTGR----YGFLLPESQIRATCEETF 402
               .:.|...|.|.   .|.|.|:|...|...||.||:..|||    |.|..|...||...||::
  Fly   265 FIKTWQYAKYAGTF---GGTSMDYALLAGFPLSFVFEMSGTGRDHVEYKFFPPARDIRHLAEESW 326

Human   403 LAIKYVASYVLE 414
            ..||..|...:|
  Fly   327 TGIKAFAEKTIE 338

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CPB1NP_001862.2 Propep_M14 29..103 CDD:280416 3/11 (27%)
M14_CPB 114..413 CDD:199852 91/311 (29%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P00730 176..179 1/2 (50%)