DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPB1 and CG8564

DIOPT Version :9

Sequence 1:NP_001862.2 Gene:CPB1 / 1360 HGNCID:2299 Length:417 Species:Homo sapiens
Sequence 2:NP_001261514.1 Gene:CG8564 / 38825 FlyBaseID:FBgn0035776 Length:520 Species:Drosophila melanogaster


Alignment Length:415 Identity:117/415 - (28%)
Similarity:186/415 - (44%) Gaps:77/415 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    32 VEDENHINIIRELASTTQIDFWKPDSVTQIKP---------HSTVDFRVKAEDTVTVENVLKQNE 87
            |.:..|:||..:.|.    |..:.|:.|.::.         |:.:|::             :.|:
  Fly    15 VVERLHLNIKCQTAK----DRSRTDATTALRRLVIPRPDILHTYLDYK-------------QVNQ 62

Human    88 -LQYKVLISNLRNVVEAQFDSRVRATGHSYEKYN------KW---ETIEAWTQQVATENPALISR 142
             |||  |.....:.|      .|...||::||..      .|   |.:|. :.|:...:|.|.. 
  Fly    63 YLQY--LAQRYAHFV------HVHILGHTHEKREIRALEINWMNSENVEL-SPQMREHSPRLFD- 117

Human   143 SVIGTTFEGR-AIYLLKVGKAGQNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTEL 206
              ||.  .|| .:.::.||:  ..:..:|::.|.|||||||.:.....:.:....|.|.|   |:
  Fly   118 --IGP--NGRFTVPVIHVGE--HCRKTVFIEAGTHAREWISVSTALNCIYQLTERYTRNI---EV 173

Human   207 LDKLDFYVLPVLNIDGYIYTWTKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGAS---RNPC 268
            |.||.|.::|::|.|||.|:.||:..|||.|..|..:..:|||.|||:|..| ..|.|   ||  
  Fly   174 LRKLRFIIVPLVNPDGYEYSRTKNPKWRKNRRPHKSAKFVGTDCNRNYDIFW-NSGPSKINRN-- 235

Human   269 DETYCGPAAESEKETKALADFIRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGENN----AELNA 329
              ||.|.:..||.||:|:...:....|::..:|::|||.|.::||:.|.    .:|    .||::
  Fly   236 --TYKGESPFSEPETRAMRCILDRMSSNLLFFLSLHSYGQSIMYPWGYC----RDNPIYWRELSS 294

Human   330 LAKATVKELASLHGTKYTYGP-GATTIYPAAGGSDDWAYD-QGIRYSFTFELRDTGRYGFLLPES 392
            ||.:....:.|.:|.:|..|. ...|....||...|:.|. ..:..:...|| .:...||..|..
  Fly   295 LANSGKSAIKSYNGREYRTGSISCLTKRTIAGSVVDYVYGVLKVPMALVMEL-PSRELGFQPPVE 358

Human   393 QIRATCEETFLAIKYVA--SYVLEH 415
            .|.....|::..|:.:.  |:.|.|
  Fly   359 MISQIGHESWYGIREMCKRSFDLRH 383

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CPB1NP_001862.2 Propep_M14 29..103 CDD:280416 16/80 (20%)
M14_CPB 114..413 CDD:199852 97/319 (30%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P00730 176..179 2/2 (100%)