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Protein Alignment TRIM50 and SPCC548.05c
DIOPT Version :9
Sequence 1: | NP_001268380.1 |
Gene: | TRIM50 / 135892 |
HGNCID: | 19017 |
Length: | 487 |
Species: | Homo sapiens |
Sequence 2: | NP_587745.1 |
Gene: | SPCC548.05c / 2539314 |
PomBaseID: | SPCC548.05c |
Length: | 468 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 99 |
Identity: | 28/99 - (28%) |
Similarity: | 47/99 - (47%) |
Gaps: | 9/99 - (9%) |
- Green bases have known domain annotations that are detailed below.
Human 9 ELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGSSSLPNVSLAR 73
:::..|:||||.|..:.|....|||:||..||:: .|.....||.|||.:....| |...:..
pombe 78 KIKKTLECPICTEALQRPFTTHCGHTYCYECLLN---WLKESKSCPTCRQKLYTQPS-PAYLVYE 138
Human 74 VIEALRLPGDPEPKVCVHHRNPLSLFCEKDQELI 107
::..:.......|.|.: :.|| .:|.:|::
pombe 139 IMNVVAASNSGFPLVGI-NENP----AKKQKEVL 167
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X48 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.000 |
|
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