DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPA1 and CG8560

DIOPT Version :9

Sequence 1:NP_001859.1 Gene:CPA1 / 1357 HGNCID:2296 Length:419 Species:Homo sapiens
Sequence 2:NP_001261516.1 Gene:CG8560 / 38830 FlyBaseID:FBgn0035781 Length:418 Species:Drosophila melanogaster


Alignment Length:417 Identity:135/417 - (32%)
Similarity:207/417 - (49%) Gaps:31/417 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     4 LLVLSVLLGAVFGKEDFVGHQVLRISVADEAQVQKVKELEDLEHLQLDFWRGPAHPGSPIDVRVP 68
            ||:.||.|..    |::.|:::..|:..:..:.|.:..|...|  ..||:..|....:...|.|.
  Fly     9 LLLASVALAV----ENYDGYKIYDINARNAFEKQLLLRLSGNE--AYDFFDLPRSLDASSRVMVK 67

Human    69 FPSIQAVKIFLESHGISY----ETMIEDVQSLLDEEQEQ-MFAFRSRARSTDTFNYATYHTLEEI 128
            ....:..:..||.:|::|    |...|.::...||.|.| :...||..||.   ::..:|...||
  Fly    68 PEDQEGFEHLLEKYGVNYSVINENFGESLRQERDENQNQRLMNLRSAERSV---SFKAFHRHAEI 129

Human   129 YDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSK--RPAIWIDTGIHSREWVTQASGVW 191
            ..:||.|.|..|..||....|.:||.|.|..:..:.|..|  :..:::|.|||:|||:..|..::
  Fly   130 NAYLDELAAAYPSRVSVQVAGKSYENRDIKTITITNGDGKTGKNVVFLDAGIHAREWIAHAGALY 194

Human   192 FAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNRMWRKTRSHTAGSLCIGVDPNRN 256
            ...::.:::   ||.:.:|...|..:..|.||||:.::|:|.|||||||. ...|.|.|.|.|||
  Fly   195 VIHQLVENF---AANSELLKDFDWVILPVVNPDGYEYSHTTTRMWRKTRK-PISSACYGTDANRN 255

Human   257 WDAGFGLSGASSNPCSETYHGKFANSEVEVKSIVDFVKD-HGNIKAFISIHSYSQLLMYPYGYKT 320
            :|..:|..||||..||:|:.|:.|.||.|.:.|.|.:.. .|..|.::::|||...|:||:|: |
  Fly   256 FDFHWGEVGASSYSCSDTFKGETAFSEPETQLIRDILLSLTGRGKFYLTLHSYGNYLLYPWGW-T 319

Human   321 EPVP----DQDELDQLSKAAVTALASLYGTKFNYGSIIKAIYQASGSTIDWTYS-QGIKYSFTFE 380
            ..:|    |.||:.|   ....|:.|..|||:..||....:|.|:|.:.|:.:. .....|.|.|
  Fly   320 SALPSSWRDNDEVAQ---GGADAIKSATGTKYTVGSSTNVLYAAAGGSDDYAFGVANFPVSITME 381

Human   381 LRDTGRYGFLLPASQIIPTAKETWLAL 407
            | ..|..||....|||.....|||:.:
  Fly   382 L-PAGGTGFNPSTSQIEGFVSETWVGI 407

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CPA1NP_001859.1 Propep_M14 32..100 CDD:396700 15/71 (21%)
M14_CPA 117..417 CDD:349442 105/299 (35%)
Substrate binding. /evidence=ECO:0000269|PubMed:18566513, ECO:0007744|PDB:2V77 179..182 1/2 (50%)