DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SDHAF4 and W02D3.12

DIOPT Version :10

Sequence 1:XP_047274166.1 Gene:SDHAF4 / 135154 HGNCID:20957 Length:111 Species:Homo sapiens
Sequence 2:NP_740875.1 Gene:W02D3.12 / 259380 WormBaseID:WBGene00020937 Length:89 Species:Caenorhabditis elegans


Alignment Length:52 Identity:16/52 - (30%)
Similarity:26/52 - (50%) Gaps:8/52 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    24 PLLCHSLRKTSSSQGGKSELVKQSLKKPKLPEGRFDAP-----EDSHLEKEP 70
            |:| :|.|:.:..:..:|  .|:.:...|.|:|..|..     ||.||:|.|
 Worm     8 PIL-NSSRRFADIKPKQS--AKEKVMAEKTPKGALDKADEQQYEDPHLKKHP 56

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SDHAF4XP_047274166.1 None
W02D3.12NP_740875.1 DUF1674 48..89 CDD:429724 6/9 (67%)

Return to query results.
Submit another query.