Protein Alignment Dscam and ImpL2

DIOPT Version :9

• Sequence 1: XP_006522949.1
• Gene: Dscam / 13508
• MGIID: 1196281
• Length: 2034
• Species: Mus musculus
• Sequence 2: NP_728961.2
• Gene: ImpL2 / 38513
• FlyBaseID: FBgn0001257
• Length: 267
• Species: Drosophila melanogaster
• Alignment Length: 198
• Identity: 42/198 - (21%)
• Similarity: 80/198 - (40%)
• Gaps: 37/198 - (18%)

Mouse   239 GQRVELPCKALGHPEPDYRWLKDNMP------LELSGRFQKTVTGLLIENSRP------SDSGSY 291
            |..:|:.|:.:|...|..:|:..::|      |:.:...::..:.::...|..      |::.:|
  Fly    73 GATIEIVCEMMGSQVPSIQWVVGHLPRSELDDLDSNQVAEEAPSAIVRVRSSHIIDHVLSEARTY 137

Mouse   292 VCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSS----------------VGSQVSLSCSVTGN 340
            .|  ..|.|:..:.....|..|..:.::|.|....                :||.:.|.|.|...
  Fly   138 TC--VGRTGSKTIYASTVVHPPRSSRLTPEKTYPGAQKPRIIYTEKTHLDLMGSNIQLPCRVHAR 200

Mouse   341 EDQELSWY--RNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFVRK--DKLSAQDYVQVV 401
            ...|::|.  .|.||:. |...|:  |.:.:|::..:...|.|.|:|..|.  .|.:|..:|..|
  Fly   201 PRAEITWLNNENKEIVQ-GHRHRV--LANGDLLISEIKWEDMGNYKCIARNVVGKDTADTFVYPV 262

Mouse   402 LED 404
            |.:
  Fly   263 LNE 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dscam	XP_006522949.1	Ig	15..115	CDD:386229
		IGc2	239..300	CDD:197706	13/72 (18%)
		IG	320..400	CDD:214652	24/99 (24%)
		Ig_3	410..488	CDD:372822
		IGc2	518..575	CDD:197706
		Ig	596..686	CDD:386229
		Ig_DSCAM	707..784	CDD:143211
		Ig	802..889	CDD:386229
		FN3	885..978	CDD:238020
		FN3	986..1083	CDD:238020
		FN3	1091..1184	CDD:238020
		FN3	1189..1278	CDD:238020
		Ig_3	1301..1363	CDD:372822
		FN3	1380..1470	CDD:238020
		FN3	1486..1555	CDD:238020
ImpL2	NP_728961.2	IGc2	187..251	CDD:197706	19/66 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3510
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900