Protein Alignment Dscam and babos

DIOPT Version :9

• Sequence 1: XP_006522949.1
• Gene: Dscam / 13508
• MGIID: 1196281
• Length: 2034
• Species: Mus musculus
• Sequence 2: NP_001286719.1
• Gene: babos / 37557
• FlyBaseID: FBgn0034724
• Length: 196
• Species: Drosophila melanogaster
• Alignment Length: 135
• Identity: 34/135 - (25%)
• Similarity: 49/135 - (36%)
• Gaps: 45/135 - (33%)

Mouse   313 PLKATISPRKVKS-------SV----GSQVSLSCSVTGN---EDQELSWYRNGEILNPGKNVRIT 363
            |...|.||..|.|       ||    |..|.|.|.|..|   .|..:.||....:::.||
  Fly    50 PSPQTKSPNPVASEKINKTLSVTGIRGEDVVLKCDVGSNLHSSDVVVLWYFGDNVISNGK----- 109

Mouse   364 GLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSPAEPVSLVC 428
                 ||:..:.               ||.| :|...:|: .:|::..::..||:    |...|.
  Fly   110 -----NLVQPNF---------------KLDA-NYDLTILK-ASPQVAGSYLCKVL----PSGSVV 148

Mouse   429 NVKGT 433
            |.|.|
  Fly   149 NTKVT 153

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dscam	XP_006522949.1	Ig	15..115	CDD:386229
		IGc2	239..300	CDD:197706
		IG	320..400	CDD:214652	22/93 (24%)
		Ig_3	410..488	CDD:372822	7/24 (29%)
		IGc2	518..575	CDD:197706
		Ig	596..686	CDD:386229
		Ig_DSCAM	707..784	CDD:143211
		Ig	802..889	CDD:386229
		FN3	885..978	CDD:238020
		FN3	986..1083	CDD:238020
		FN3	1091..1184	CDD:238020
		FN3	1189..1278	CDD:238020
		Ig_3	1301..1363	CDD:372822
		FN3	1380..1470	CDD:238020
		FN3	1486..1555	CDD:238020
babos	NP_001286719.1	ig	70..154	CDD:278476	28/115 (24%)
		IG_like	70..154	CDD:214653	28/115 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3510
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900