Sequence 1: | XP_006522949.1 | Gene: | Dscam / 13508 | MGIID: | 1196281 | Length: | 2034 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162911.1 | Gene: | Pvr / 34127 | FlyBaseID: | FBgn0032006 | Length: | 1577 | Species: | Drosophila melanogaster |
Alignment Length: | 1395 | Identity: | 254/1395 - (18%) |
---|---|---|---|
Similarity: | 427/1395 - (30%) | Gaps: | 467/1395 - (33%) |
- Green bases have known domain annotations that are detailed below.
Mouse 92 STLIHD----NTYYCTAENPSG--KIRSQDVHIKAV-----LREPYTVRVEDQKTMRGNVAVFKC 145
Mouse 146 IIPSSVEAYVTVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNE--DGLYNYRCITRHRYT---- 204
Mouse 205 -----------------GETRQSNSARLFVSDPAN----SAPSILDGFDHRKAMAGQRVELPCKA 248
Mouse 249 LGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENSRP-----------SDSGSYVCEVSNR-YGT 301
Mouse 302 AKVI----GRLYVKQ---------PLKATISPRK-----------VKSSVGSQV------SLSC- 335
Mouse 336 ------SVTGNEDQELSWYRNGEILN------------PGKNVRITGLNHANLIMDHMVKSDGGA 382
Mouse 383 YQCFVRKDKLSAQDYVQVVLEDGTPKI-ISAFSEKVVSPAEP-------------VSLVCNVKGT 433
Mouse 434 PLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQAR 498
Mouse 499 INVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLSD 563
Mouse 564 VQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITI 628
Mouse 629 TWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLM--HNGNYTCIARN-----EAAAVEHQSQLIV 686
Mouse 687 RVPPKFVVQPRDQDGIYGKA--VILNCSAEGYPVP-TIVWKFSKGAGVPQFQPIAL-NGRIQVLS 747
Mouse 748 NGSLLIKHVVEEDSGYYLCKV-SNDVGADV-SKSMYLTVKIPAMITSYPNTTLATQ--------- 801
Mouse 802 -GQRKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTKEVGEEVISTLQILPTVREDSGFFSC 865
Mouse 866 HAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWT------------------------ 906
Mouse 907 --------------------------MGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSA 945
Mouse 946 TIIDIHPSSTYSIRMYAKNRIGKSEPSNEITI-----TADEAAPDGPPQEVHLEPTSSQSIR--- 1002
Mouse 1003 ----VTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQ----------FNIISIDTTG-DSEVYT-- 1050
Mouse 1051 -LDNLN----------KFTQYGLVVQA----------------------------CNRAGTGPSS 1076
Mouse 1077 QE----------IITTTLED-------------VPSYPPENVQAIATSPESISISWS-------- 1110
Mouse 1111 -TLSKEALNGILQGFRVIYWANLIDGELGEIKNVTTTQPSLELDGLEKYTNYSIQV--LAFTRAG 1172
Mouse 1173 DGVRSE------------QIFTRTKEDVPG 1190 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam | XP_006522949.1 | Ig | 15..115 | CDD:386229 | 7/28 (25%) |
IGc2 | 239..300 | CDD:197706 | 14/72 (19%) | ||
IG | 320..400 | CDD:214652 | 26/115 (23%) | ||
Ig_3 | 410..488 | CDD:372822 | 17/90 (19%) | ||
IGc2 | 518..575 | CDD:197706 | 8/56 (14%) | ||
Ig | 596..686 | CDD:386229 | 20/96 (21%) | ||
Ig_DSCAM | 707..784 | CDD:143211 | 17/80 (21%) | ||
Ig | 802..889 | CDD:386229 | 20/86 (23%) | ||
FN3 | 885..978 | CDD:238020 | 12/147 (8%) | ||
FN3 | 986..1083 | CDD:238020 | 25/165 (15%) | ||
FN3 | 1091..1184 | CDD:238020 | 20/115 (17%) | ||
FN3 | 1189..1278 | CDD:238020 | 2/2 (100%) | ||
Ig_3 | 1301..1363 | CDD:372822 | |||
FN3 | 1380..1470 | CDD:238020 | |||
FN3 | 1486..1555 | CDD:238020 | |||
Pvr | NP_001162911.1 | IG | 346..432 | CDD:214652 | 22/99 (22%) |
Ig | <363..432 | CDD:299845 | 17/82 (21%) | ||
Ig | 466..533 | CDD:299845 | 18/69 (26%) | ||
IG_like | 672..754 | CDD:214653 | 17/82 (21%) | ||
Ig | 674..739 | CDD:143165 | 12/65 (18%) | ||
IGc2 | 779..840 | CDD:197706 | 19/67 (28%) | ||
PKc_like | 927..1332 | CDD:304357 | 62/380 (16%) | ||
Pkinase_Tyr | 935..1329 | CDD:285015 | 61/365 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |