Sequence 1: | XP_006522949.1 | Gene: | Dscam / 13508 | MGIID: | 1196281 | Length: | 2034 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608822.1 | Gene: | bdl / 33635 | FlyBaseID: | FBgn0028482 | Length: | 719 | Species: | Drosophila melanogaster |
Alignment Length: | 726 | Identity: | 167/726 - (23%) |
---|---|---|---|
Similarity: | 261/726 - (35%) | Gaps: | 214/726 - (29%) |
- Green bases have known domain annotations that are detailed below.
Mouse 434 PLP-TVTWTLDDDPILKGSGHR--ISQMITSEGNVV--------SYLNISSSQVRDGGVYRCTA- 486
Mouse 487 --NNSAGV----VLYQARINVRGPASIR-PMKNITAIAGRDTYIHCRVIGYPYYS-IKWYKNANL 543
Mouse 544 LPFNH---RQVAFENNGTLKLSDVQKEVDEGEYTCNVL-VQPQLSTSQ---SVHVTVKV----PP 597
Mouse 598 FIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNID-------FTSSLR 655
Mouse 656 ISNLSLMHNGNYTCIARNEAAAVEHQS---QLIVRVPPKFVVQPRDQDGIY----GKAVILNCSA 713
Mouse 714 ---EGYPVPTIVWKFSKGAGVP--QFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVG 773
Mouse 774 ADVSKSMYLTVKIPAMITSYPNTTLATQGQRKEMSCTAHG-EKPIIVRWEKEDRIINPEMARYLV 837
Mouse 838 STKEVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEI--------- 893
Mouse 894 -----KDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPS 953
Mouse 954 STYSIRMYAKNRIGKSEPSNEITITADEA---APDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNG 1015
Mouse 1016 IIRGYQIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEII 1080
Mouse 1081 TT--TLEDVPS 1089 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam | XP_006522949.1 | Ig | 15..115 | CDD:386229 | |
IGc2 | 239..300 | CDD:197706 | |||
IG | 320..400 | CDD:214652 | |||
Ig_3 | 410..488 | CDD:372822 | 14/67 (21%) | ||
IGc2 | 518..575 | CDD:197706 | 19/60 (32%) | ||
Ig | 596..686 | CDD:386229 | 19/99 (19%) | ||
Ig_DSCAM | 707..784 | CDD:143211 | 22/81 (27%) | ||
Ig | 802..889 | CDD:386229 | 17/87 (20%) | ||
FN3 | 885..978 | CDD:238020 | 17/106 (16%) | ||
FN3 | 986..1083 | CDD:238020 | 22/98 (22%) | ||
FN3 | 1091..1184 | CDD:238020 | |||
FN3 | 1189..1278 | CDD:238020 | |||
Ig_3 | 1301..1363 | CDD:372822 | |||
FN3 | 1380..1470 | CDD:238020 | |||
FN3 | 1486..1555 | CDD:238020 | |||
bdl | NP_608822.1 | IG_like | 42..128 | CDD:214653 | 14/63 (22%) |
Ig | 43..131 | CDD:299845 | 14/66 (21%) | ||
I-set | 153..242 | CDD:254352 | 28/90 (31%) | ||
Ig | 157..242 | CDD:299845 | 25/86 (29%) | ||
Ig_2 | 252..337 | CDD:290606 | 19/100 (19%) | ||
IG_like | 260..327 | CDD:214653 | 16/75 (21%) | ||
I-set | 341..428 | CDD:254352 | 33/114 (29%) | ||
IGc2 | 356..419 | CDD:197706 | 24/72 (33%) | ||
FN3 | 435..524 | CDD:238020 | 20/111 (18%) | ||
FN3 | 554..636 | CDD:238020 | 25/115 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10075 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |