Sequence 1: | XP_006522949.1 | Gene: | Dscam / 13508 | MGIID: | 1196281 | Length: | 2034 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723828.1 | Gene: | DIP-kappa / 318958 | FlyBaseID: | FBgn0051814 | Length: | 672 | Species: | Drosophila melanogaster |
Alignment Length: | 728 | Identity: | 146/728 - (20%) |
---|---|---|---|
Similarity: | 224/728 - (30%) | Gaps: | 269/728 - (36%) |
- Green bases have known domain annotations that are detailed below.
Mouse 424 VSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGGVYRCTANN 488
Mouse 489 SAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYK--NANLLPFNHRQV 551
Mouse 552 AFENNGTLKLSDVQ---------KEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFPRF 607
Mouse 608 SIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIAR 672
Mouse 673 NEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPI 737
Mouse 738 ALNGRIQVLSNGSLL-IKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTL-AT 800
Mouse 801 QGQRKEMSCTAHGEKPIIVRW--EKEDRIINPEMARYLVSTKEVGE--EVIST---------LQI 852
Mouse 853 LPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKARTITL----RWTMGFDGNS 913
Mouse 914 PITGYDIECKNKSDSW-DSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNEITI 977
Mouse 978 TADEAAPDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISIDT 1042
Mouse 1043 TGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPS-YPPENVQAIATSPESI- 1105
Mouse 1106 -----SISWSTLS 1113 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam | XP_006522949.1 | Ig | 15..115 | CDD:386229 | |
IGc2 | 239..300 | CDD:197706 | |||
IG | 320..400 | CDD:214652 | |||
Ig_3 | 410..488 | CDD:372822 | 12/63 (19%) | ||
IGc2 | 518..575 | CDD:197706 | 15/67 (22%) | ||
Ig | 596..686 | CDD:386229 | 6/89 (7%) | ||
Ig_DSCAM | 707..784 | CDD:143211 | 24/77 (31%) | ||
Ig | 802..889 | CDD:386229 | 29/99 (29%) | ||
FN3 | 885..978 | CDD:238020 | 15/97 (15%) | ||
FN3 | 986..1083 | CDD:238020 | 15/96 (16%) | ||
FN3 | 1091..1184 | CDD:238020 | 8/29 (28%) | ||
FN3 | 1189..1278 | CDD:238020 | |||
Ig_3 | 1301..1363 | CDD:372822 | |||
FN3 | 1380..1470 | CDD:238020 | |||
FN3 | 1486..1555 | CDD:238020 | |||
DIP-kappa | NP_723828.1 | Ig | 80..172 | CDD:299845 | 21/93 (23%) |
IG_like | 82..174 | CDD:214653 | 22/93 (24%) | ||
IG_like | 184..267 | CDD:214653 | 28/132 (21%) | ||
IGc2 | 191..255 | CDD:197706 | 21/69 (30%) | ||
IG_like | 282..368 | CDD:214653 | 27/93 (29%) | ||
Ig | 288..367 | CDD:143165 | 23/86 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |