DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dnmt3b and sba

DIOPT Version :10

Sequence 1:XP_006498745.1 Gene:Dnmt3b / 13436 MGIID:1261819 Length:872 Species:Mus musculus
Sequence 2:NP_001262888.1 Gene:sba / 42824 FlyBaseID:FBgn0016754 Length:1606 Species:Drosophila melanogaster


Alignment Length:467 Identity:88/467 - (18%)
Similarity:144/467 - (30%) Gaps:146/467 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 EPSSEPHSLETMKGDSRHLNEEEGASGYEECIIVNGNFSDQSSDTKDAPSPPVLEAICTEPVCTP 66
            :|:.:|..:......:.::.|..              .|.|.:    |.|||      ....|:|
  Fly  1157 QPAPQPTQISLQPAQATYMTETV--------------MSRQGT----AASPP------DTTTCSP 1197

Mouse    67 ETRGRRSSSRLSKREVSSLLNYTQDMTGDGDRDDEVDDGNGSDILMPKLTRETKDTRT----RSE 127
            .:..|.||.|.|..::...::.::.......:..|......|......:.:....|:.    :..
  Fly  1198 RSPERPSSHRSSGSDMVQCVSSSEPDAAVSPQSTESRQSPSSTDCERSICKNNVFTQPSGIYKHS 1262

Mouse   128 SPAVRTRH-------SNGTSSLERQRASPRITR----GRQGRHHVQEYPVEFPATRSRRRRASSS 181
            .|.:|..|       .||.|.::.|. ||..|:    ....:..|::..|..|..||||.:..::
  Fly  1263 EPKIRRIHITSQTSAENGISLMQGQE-SPTTTQLLSSVPTAQPTVEKTTVRTPTKRSRRPQRGAA 1326

Mouse   182 ASTPWSSPASVDFMEEVTPKSVSTPSVDLSQDGDQEGMDTTQVDAESRDGDSTEYQDDKEFGIGD 246
            .:.|.:|           .||...|                                .:.|.||:
  Fly  1327 RAAPSAS-----------DKSFPLP--------------------------------PRSFAIGE 1348

Mouse   247 LVWGKIKGFSWWPAMVVSWK---ATSKRQAMPGMRWVQWFGDGKFSEISADKLVALGLFSQHFNL 308
            |:||..:|...||..:|...   .|..:|.  ...||||||.|                      
  Fly  1349 LIWGPARGHPAWPGKIVKMPDGVCTPSQQF--DHVWVQWFGGG---------------------- 1389

Mouse   309 ATFNKLVSYRKAMYHTLEKARVRAGKTFSS-SPGESLEDQLKPMLEWAHGGFKPTGIEGLKPNKK 372
                                    |::.|. .|..||: .|...||..|...|.|        :|
  Fly  1390 ------------------------GRSTSELIPVNSLQ-SLSEGLEAHHKAQKDT--------RK 1421

Mouse   373 QPVVNKSKVRRSDSRNLEPRRRENKSRRRTTNDSAASESPPPKRLKTNSYGGKD--RGEDEESRE 435
            ...:|....|.......|.......|....|:.|:|:.|..|........||:.  :.:.::.::
  Fly  1422 SRKLNSQLERAIQEAMTELDNISASSTPAATSSSSATISAVPASAGPAVIGGQQQYQQQQQQQQQ 1486

Mouse   436 RMASEVTNNKGN 447
            :.:...||||.|
  Fly  1487 QQSPSSTNNKIN 1498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dnmt3bXP_006498745.1 PWWP_DNMT3B 243..359 CDD:438983 27/119 (23%)
ADDz_Dnmt3b 448..567 CDD:277254 88/467 (19%)
Dcm 591..869 CDD:440040
sbaNP_001262888.1 MBD 241..315 CDD:128673
PWWP_MBD5 1344..1441 CDD:438969 34/153 (22%)
Blue background indicates that the domain is not in the aligned region.

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