DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX6A2 and COX6AL2

DIOPT Version :10

Sequence 1:NP_005196.1 Gene:COX6A2 / 1339 HGNCID:2279 Length:97 Species:Homo sapiens
Sequence 2:NP_649075.1 Gene:COX6AL2 / 40066 FlyBaseID:FBgn0036830 Length:289 Species:Drosophila melanogaster


Alignment Length:104 Identity:38/104 - (36%)
Similarity:50/104 - (48%) Gaps:19/104 - (18%)


- Green bases have known domain annotations that are detailed below.


Human     6 RPLTRGLASAAKGGHGGAGART-------------WRLLTFVLALPSVALCTFNSYLHSGHRPRP 57
            :|||     |.:||..|...||             |:.::....||.:|:.|...:.......|.
  Fly   131 KPLT-----AIQGGDLGCPGRTGKKPQIVAQHSKLWQKISLFGVLPMIAILTLLVFSTRSEEERL 190

Human    58 EFRPYQHLRIRTKPYPWGDGNHTLFHNSHVNPL-PTGYE 95
            ||:.|:|:..|||.|.:.|||.|.|||||.|.| |.|||
  Fly   191 EFKNYEHMYRRTKRYWFKDGNRTAFHNSHFNALPPAGYE 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX6A2NP_005196.1 Cyt_c_Oxidase_VIa 26..95 CDD:238465 29/82 (35%)
COX6AL2NP_649075.1 Cyt_c_Oxidase_VIa 146..229 CDD:238465 29/82 (35%)

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