DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dll3 and Ser

DIOPT Version :9

Sequence 1:NP_031892.2 Gene:Dll3 / 13389 MGIID:1096877 Length:585 Species:Mus musculus
Sequence 2:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster


Alignment Length:652 Identity:162/652 - (24%)
Similarity:214/652 - (32%) Gaps:236/652 - (36%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 LILAFLLPQALPAGVFELQIHSFG--------------PGPGLGTPRSPCNARGPCRLFFRVCLK 63
            |||..|:.:...||.|||:|....              |.....|....|:   ||...||:|||
  Fly    71 LILILLVHKISAAGNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGCS---PCTTAFRLCLK 132

Mouse    64 PGVSQEATESLCALGAALSTSVP---VYTEHPGESAAALPLPD-GLVRVPFRDAWPGTFSLVIET 124
               ..:.||.    ||::||...   ..|:..|.|:..|..|. |.:.:||...|..:|:|:::.
  Fly   133 ---EYQTTEQ----GASISTGCSFGNATTKILGGSSFVLSDPGVGAIVLPFTFRWTKSFTLILQA 190

Mouse   125 W---------REQLGEHAG-------GPAWNLLARVVGRRRLAAGGPWARDVQRTGTWELHFSYR 173
            .         .|:|.|...       .|.|..|.. :||.        ||         :.:..|
  Fly   191 LDMYNTSYPDAERLIEETSYSGVILPSPEWKTLDH-IGRN--------AR---------ITYRVR 237

Mouse   174 ARCEPPAVGAACARLCRSRS---APSRCG-PGLRPCTPFPD--ECEAPSVCRPGCSPEHGYCEEP 232
            .:|........|...||.|.   ....|| .|.:.|.....  .|| .::|:.||.|.||.|:.|
  Fly   238 VQCAVTYYNTTCTTFCRPRDDQFGHYACGSEGQKLCLNGWQGVNCE-EAICKAGCDPVHGKCDRP 301

Mouse   233 DECRCLEGWTGPLCTVPVSTSSCLNSRVPGPASTGCLLPGPGPCDGN-----------------P 280
            .||.|..||.||||...:....|.:....|.| ..|:      ||.|                 |
  Fly   302 GECECRPGWRGPLCNECMVYPGCKHGSCNGSA-WKCV------CDTNWGGILCDQDLNFCGTHEP 359

Mouse   281 CANGGSCSETS-GSFECACPRGFYGLRCEVSGVTCADGPCFNGGLCV------------------ 326
            |.:||:|..|: ..:.|.|..|..|.:||:....||..||.|||.|.                  
  Fly   360 CKHGGTCENTAPDKYRCTCAEGLSGEQCEIVEHPCATRPCRNGGTCTLKTSNRTQAQVYRTSHGR 424

Mouse   327 ---------------------------GGEDPDSA--------------YVCHCPPGFQGSNCEK 350
                                       |...|...              :.|.|..|:.|..||.
  Fly   425 SNMGRPVRRSSSMRSLDHLRPEGQALNGSSSPGLVSLGSLQLQQQLAPDFTCDCAAGWTGPTCEI 489

Mouse   351 RVDRCSLQPCQNGGLCLDLGHALRCR--------------------------------------- 376
            .:|.|:..||::||.|:||....||.                                       
  Fly   490 NIDECAGGPCEHGGTCIDLIGGFRCECPPEWHGDVCQVDVNECEAPHSAGIAANALLTTTATAII 554

Mouse   377 -------------------------------------------CRAGFAGPRCEHDLDDCAGRAC 398
                                                       |:.|:.|..|..:||||.|: |
  Fly   555 GSNLSSTALLAALTSAVASTSLAIGPCINAKECRNQPGSFACICKEGWGGVTCAENLDDCVGQ-C 618

Mouse   399 ANGGTCVEGGGSRRCSCALGFGGRDCRERADPCASRPCAHGGRCYAHFSGLVCACAPGYMGVRCE 463
            .||.||::.....||:||.||.||||....|.||:.||.:||.|........|.|..||.|..||
  Fly   619 RNGATCIDLVNDYRCACASGFKGRDCETDIDECATSPCRNGGECVDMVGKFNCICPLGYSGSLCE 683

Mouse   464 FA 465
            .|
  Fly   684 EA 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dll3NP_031892.2 MNNL 25..85 CDD:284966 22/73 (30%)
DSL 156..246 CDD:302925 29/95 (31%)
EGF_CA 277..308 CDD:238011 12/48 (25%)
EGF_CA 314..349 CDD:238011 14/93 (15%)
EGF_CA 352..387 CDD:238011 14/116 (12%)
EGF_CA 389..424 CDD:238011 18/34 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 548..567
SerNP_001287558.1 MNNL 83..161 CDD:284966 24/87 (28%)
DSL 220..282 CDD:279722 16/79 (20%)
EGF_CA 350..388 CDD:238011 10/37 (27%)
EGF_CA 490..526 CDD:238011 11/35 (31%)
EGF_CA 610..645 CDD:238011 19/35 (54%)
EGF_CA 647..683 CDD:238011 13/35 (37%)
EGF_CA 798..833 CDD:238011
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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