DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dll1 and Dl

DIOPT Version :9

Sequence 1:XP_011244569.1 Gene:Dll1 / 13388 MGIID:104659 Length:732 Species:Mus musculus
Sequence 2:NP_001247193.1 Gene:Dl / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster


Alignment Length:691 Identity:276/691 - (39%)
Similarity:367/691 - (53%) Gaps:95/691 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse    11 VVSALLC-----QVWSSGVFELKLQEFVNKKGLLGNRNCCRG---GSGPPC--ACRTFFRVCLKH 65
            :::|.:|     ||.|||.|||:|:.|.|..|......||.|   |:...|  :|:|.|||||||
  Fly     7 LLTAFICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCLGSCKTRFRVCLKH 71

Mouse    66 YQASVSPEPPCTYGSAVTPVLGVDSFSLPDGAGI-DPAFSNPIRFPFGFTWPGTFSLIIEALHTD 129
            |||::.....||||..:||:||.:|.:|.|.... :..|:|||:|||.|:||||||||:||.|..
  Fly    72 YQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSFSWPGTFSLIVEAWHDT 136

Mouse   130 SPDDLATENPERLISRLTTQRHLTVGEEWSQDLHSSGRTDLRYSYRFVCDEHYYGEGCSVFCRPR 194
            :....|..| :.||.||..|:.|.|..||..:...|..|.|.|.:|..||.:|||.||:.|||||
  Fly   137 NNSGNARTN-KLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSGCAKFCRPR 200

Mouse   195 DDAFGHFTCGDRGEKMCDPGWKGQYCTDPICLPGCDDQHGYCDKPGECKCRVGWQGRYCDECIRY 259
            ||:|||.||.:.||.:|..||:|.||..|.|..||  :||:||||.:|.|::||:|..|:||:..
  Fly   201 DDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGC--EHGHCDKPNQCVCQLGWKGALCNECVLE 263

Mouse   260 PGCLHGTCQQPWQCNCQEGWGGLFCNQDLNYCTHHKPCRNGATCTNTGQGSYTCSCRPGYTGANC 324
            |.|:||||.:||.|.|.||||||:|||||||||:|:||:||.||.|||:|.|||.|.|||:|.:|
  Fly   264 PNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYSGDDC 328

Mouse   325 ELEVDECAP--SPCKNGASCTD---LEDSFSCTCPPGFYGKVCELSAMTCADGPCFNGGRCSDNP 384
            |.|:..|..  :||:||.:|.|   .:..:.|.|..|:.||:||...:||:|.|| :.|.|.:..
  Fly   329 ENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPC-HQGICRNVR 392

Mouse   385 DG------GYTCHCPLGFSGFNCEKKMDLCGSSP------------------------------- 412
            .|      ||.|.||:|:||.||:.::|.|..:|                               
  Fly   393 PGLGSKGQGYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSGKCICPAGFSGTRCETNIDDC 457

Mouse   413 ----CSNGAKCVDLGNSYLCRCQAGFSGRYCEDNVDDCASSPCANGGTCRDSVNDFSCTCPPGYT 473
                |.||..|:|:.|.|.|:|..||.|.:|...||.|...||||||||.:..||:.|||..|:|
  Fly   458 LGHQCENGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCTCRAGFT 522

Mouse   474 GKNCSAPVSRCEHAPCHNGATCHQRGQRYMCECAQGYGGPNCQFLLPEPPPGPMVVDLSERHMES 538
            ||:||..:..|...|||||.||..|...:.|.||.|:.|..|.    |.....:..|..:....:
  Fly   523 GKDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCD----EESYDSVTFDAHQYGATT 583

Mouse   539 QGG-----------------PFPWVAVCAGVVLVLLLLLGCAAVVVCVRLKLQKHQPPPEPCGGE 586
            |..                 ..|.|||.|            |.||.|::.|.::.|...:....:
  Fly   584 QARADGLTNAQVVLIAVFSVAMPLVAVIA------------ACVVFCMKRKRKRAQEKDDAEARK 636

Mouse   587 TETMNNLANCQRE-KDVSVSIIGATQIKNTNKKADFHGDHG 626
            ....|.:|..... ..|.|::..|:....|...:....|.|
  Fly   637 QNEQNAVATMHHNGSGVGVALASASLGGKTGSNSGLTFDGG 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dll1XP_011244569.1 MNNL 22..91 CDD:400141 34/73 (47%)
DSL 158..220 CDD:128366 31/61 (51%)
EGF_CA 287..325 CDD:238011 25/37 (68%)
EGF_CA 328..363 CDD:238011 12/39 (31%)
EGF_CA <372..402 CDD:238011 14/35 (40%)
EGF_CA <411..440 CDD:238011 13/63 (21%)
EGF_CA 442..477 CDD:238011 20/34 (59%)
EGF 484..514 CDD:394967 14/29 (48%)
DlNP_001247193.1 MNNL 23..96 CDD:284966 34/72 (47%)
DSL 164..226 CDD:279722 31/61 (51%)
EGF_CA 291..329 CDD:238011 25/37 (68%)
EGF_CA 337..372 CDD:238011 11/34 (32%)
EGF_CA 453..488 CDD:238011 12/34 (35%)
EGF_CA 492..526 CDD:238011 20/33 (61%)
EGF_CA 529..564 CDD:238011 14/34 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834951
Domainoid 1 1.000 85 1.000 Domainoid score I8193
eggNOG 1 0.900 - - E33208_3BEE5
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4104
Inparanoid 1 1.050 554 1.000 Inparanoid score I1110
Isobase 1 0.950 - 0 Normalized mean entropy S5376
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 1 1.000 - - FOG0002026
OrthoInspector 1 1.000 - - otm43536
orthoMCL 1 0.900 - - OOG6_104568
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4539
SonicParanoid 1 1.000 - - X1332
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.640

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