DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dlk1 and NimA

DIOPT Version :10

Sequence 1:NP_034182.2 Gene:Dlk1 / 13386 MGIID:94900 Length:385 Species:Mus musculus
Sequence 2:NP_609691.6 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster


Alignment Length:376 Identity:83/376 - (22%)
Similarity:123/376 - (32%) Gaps:133/376 - (35%)


- Green bases have known domain annotations that are detailed below.


Mouse    45 CHVGWEGPLCD-----KCVTAPGCVNGVCKEPWQCICKDGWDGKFCEIDVRACTSTPCANNGTCV 104
            |..|:||.|.|     |.:...||..|.|..|..|.|::|:.||.|   .:.|            
  Fly   112 CCQGYEGNLSDSQATCKPICRGGCGRGSCVMPDICSCEEGYIGKHC---TQRC------------ 161

Mouse   105 DLEKGQYECSCTPGFSGKDCQHKAGPCVINGSPCQHGGACVDDEGQASHASCLCPPGFSGNFCEI 169
            |.::.           |.||:        |...||:|.||.:..|     .|.|..|::|.|||:
  Fly   162 DHDRW-----------GLDCK--------NLCQCQNGAACDNKSG-----LCHCIAGWTGQFCEL 202

Mouse   170 VAATNSCTPNPCENDGVCTDIGGDFRCRCPAGFVDKTCSRPVSNCASGPCQ-NGGTCLQHTQ--- 230
                                       .||.|.....| |...:|...||. ..|.|:|..|   
  Fly   203 ---------------------------PCPQGTYGIMC-RKACDCDEKPCNPQTGACIQQDQPLQ 239

Mouse   231 --VSF-------ECLCKPPFMG-------------------PTCAKKRGASPVQVTHLPSGYGLT 267
              ||.       ..|.|   ||                   ||..:....||..:.|..|...|.
  Fly   240 LNVSHVIVETVNSTLEK---MGIIPRPTTPVPLPEVIVIKQPTSNENAQHSPKIIVHQSSSDLLE 301

Mouse   268 YRLTPGVHELP-----------VQQPEQHILKVSMKELNKSTPLLTEGQA-ICFTILGVLTSLVV 320
            ...|.....:|           :..|::|:......|.|.|.....:.|: :..|::.::..|:|
  Fly   302 NLHTAAAAGVPTPEVIHVITNGITSPQEHLAGFVGGEANSSQTATADHQSGLVVTLVSIMLLLLV 366

Mouse   321 LGTVAIVFLNKCETWVSNLRYNHMLRKKKNLLLQYNSGEELAVNIIFPEKI 371
            ...|..:::.:        ||:|     ||..: ||:...:......||.:
  Fly   367 AIAVGSLYVYR--------RYHH-----KNAAV-YNANGTVTTLPANPEVV 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlk1NP_034182.2 EGF_CA 88..125 CDD:238011 4/36 (11%)
EGF_CA 135..168 CDD:238011 11/32 (34%)
EGF_CA 177..207 CDD:238011 3/29 (10%)
EGF_CA 214..246 CDD:238011 14/63 (22%)
NimANP_609691.6 EMI 51..118 CDD:462204 2/5 (40%)

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