DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX6A1 and cox6a1

DIOPT Version :10

Sequence 1:NP_004364.2 Gene:COX6A1 / 1337 HGNCID:2277 Length:109 Species:Homo sapiens
Sequence 2:NP_001005592.2 Gene:cox6a1 / 335774 ZFINID:ZDB-GENE-030131-7715 Length:108 Species:Danio rerio


Alignment Length:111 Identity:67/111 - (60%)
Similarity:79/111 - (71%) Gaps:5/111 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAVVGVSSVSRLLGRSRPQLGRPMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGE 65
            ||.:|..| .:|...:.....|.:|:.||| |.:|:.||.|||.||||||||.|||:||:|.| .
Zfish     1 MAAIGRLS-QKLFKSAALTQSRQLSAAAHG-ENAAKTWKILTFVVALPGVAVCMLNMYLRSQH-H 62

Human    66 HERPEFIAYPHLRIRTKPFPWGDGNHTLFHNPHVNPLPTGYE--DE 109
            ||:|||:.|.|||||:|.|||||||.|||||||||.||.|||  ||
Zfish    63 HEQPEFVPYSHLRIRSKRFPWGDGNKTLFHNPHVNALPDGYEHHDE 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX6A1NP_004364.2 Cyt_c_Oxidase_VIa 22..107 CDD:238465 58/84 (69%)
cox6a1NP_001005592.2 None

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