DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EGFLAM and egflam

DIOPT Version :10

Sequence 1:NP_001192230.1 Gene:EGFLAM / 133584 HGNCID:26810 Length:1017 Species:Homo sapiens
Sequence 2:XP_073808033.1 Gene:egflam / 799405 ZFINID:ZDB-GENE-070705-525 Length:1095 Species:Danio rerio


Alignment Length:1032 Identity:609/1032 - (59%)
Similarity:785/1032 - (76%) Gaps:45/1032 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    26 RAAIRKPGKVGPPLDIKLGALNCTAFSIQWKMPRHPGSPILGYTVFYSEVGADKSLQEQ-LHSVP 89
            ::..||..::.|||||:|..:||||||::|||||...|.|.||.|||:|:..::..... :..||
Zfish    64 KSGARKSERLSPPLDIQLETVNCTAFSVRWKMPRRHVSTITGYKVFYTEMRNNRPTSNAVVLEVP 128

Human    90 LSRDIPTT---------EEVIGDLKPGTEYRVSIAAYSQAGKGRLSSPRHVTTLSQDSCLPPAAP 145
            ||.::.||         :.|||:||..|:||||:.||..||:||.|.||.::|.|.:.|:|||.|
Zfish   129 LSLEMLTTGQFDGQASFDVVIGNLKVATQYRVSVGAYGWAGEGRPSMPRDISTGSHEKCMPPAPP 193

Human   146 QQPHVIVVSDSEVALSWKPGASEGSAPIQYYSVEFIRPDFDKKWTSIHERIQMDSMVIKGLDPDT 210
            .||:|:.|||:|:|:||:.|.|:||||:.|:.|.:|||:.|.:||.|.|.::.:|||:|||.|:|
Zfish   194 TQPNVVAVSDTELAMSWQHGESDGSAPVLYFLVAYIRPEMDTEWTYIREPVESNSMVLKGLIPET 258

Human   211 NYQFAVRAMNSHGPSPRSWPSDIIRTLCPEEAGSGRYGPRYITDMGAGEDDEGFEDDLDLDISFE 275
            .|||.:||:|:||.||.|..::.:|||...:.|||.|.. ||::....::|:...||.|.|...|
Zfish   259 EYQFVIRAVNAHGISPPSAINNPVRTLGSVDTGSGDYDV-YISNSDNKDEDKLDIDDSDYDFFIE 322

Human   276 EVKPLPATKGGNKKFLVESKKMSISNPKTISRL---------IPPTSASLPVTTVAPQPI----- 326
            |:| .|::|...::..:.|:..:..|...|.|:         ..||:||:..||.....:     
Zfish   323 EMK-FPSSKKSGRRSQLRSRIGTPGNGNVIYRMRTPVSPNISFTPTTASIWTTTTTTTTVTMTTT 386

Human   327 ------PIQRKGKNGVAIMS-------------RLFDMPCDETLCSADSFCVNDYTWGGSRCQCT 372
                  ||.|......|:.|             |::|:||:||:|.|||||:|||..|||||.|.
Zfish   387 SRTTATPIVRTATPPPAVPSSSPSMTPWKGERARVYDVPCEETVCPADSFCINDYDTGGSRCHCN 451

Human   373 LGKGGESCSEDIVIQYPQFFGHSYVTFEPLKNSYQAFQITLEFRAEAEDGLLLYCGENEHGRGDF 437
            ||:.|:.|||.:.|.:|:|:|:|::||||||||||:|||:|||:|||||||||||||||||||||
Zfish   452 LGRQGDFCSEGLTINFPKFYGYSHMTFEPLKNSYQSFQISLEFKAEAEDGLLLYCGENEHGRGDF 516

Human   438 MSLAIIRRSLQFRFNCGTGVAIIVSETKIKLGGWHTVMLYRDGLNGLLQLNNGTPVTGQSQGQYS 502
            .|||:||..|.:|||||||.|.|:|::.|.:|.||||.::|||:||.|:|:|.|||:.:|||||:
Zfish   517 TSLALIRGKLHYRFNCGTGAAQIISDSSIVIGQWHTVTIFRDGMNGWLRLDNDTPVSSRSQGQYT 581

Human   503 KITFRTPLYLGGAPSAYWLVRATGTNRGFQGCVQSLAVNGRRIDMRPWPLGKALSGADVGECSSG 567
            ||||||.|:|||||:.||||||.|||||||||:|||.||.:.||:||||.|.||||||:||||:.
Zfish   582 KITFRTALFLGGAPNGYWLVRAVGTNRGFQGCMQSLTVNSKAIDIRPWPKGNALSGADIGECSNS 646

Human   568 ICDEASCIHGGTCTAIKADSYICLCPLGFKGRHCEDAFTLTIPQFRESLRSYAATPWPLEPQHYL 632
            :|::.:|.:||.|.|.:||.:|||||||:||..||::|.|::|||.:|:.|||:.|||....:||
Zfish   647 VCEKVTCANGGICFANRADGFICLCPLGYKGFLCEESFLLSLPQFNQSMFSYASAPWPQSSHNYL 711

Human   633 SFMEFEITFRPDSGDGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDPLTLGNWHE 697
            ||||||:||:|.|.||.|||:.|..|:|||||:|..|:||||||||||..|:|||:.:.:..|||
Zfish   712 SFMEFEVTFQPTSPDGTLLYTDDATSRDFLSISLVAGYVEFRFDCGSGATVIRSEEAIAMNVWHE 776

Human   698 LRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPFSGSIQKI 762
            |||||||||||||||.|:.|||||||.||||||::.::||||||||..|.::|:|:|:|||:|||
Zfish   777 LRVSRTAKNGILQVDNQRPVEGMAEGAFTQIKCSSPLYIGGVPNYDITKPSAGILRPYSGSVQKI 841

Human   763 ILNDRTIHVKHDFTSGVNVENAAHPCVRAPCAHGGSCRPRKEGYDCDCPLGFEGLHCQKECGNYC 827
            .||||.|.:......||||.|||||||..|||:||:||.:.:.|||||.||::|.||||||||||
Zfish   842 TLNDRGIELNPGQAFGVNVLNAAHPCVDNPCANGGTCRAKWDEYDCDCALGYDGKHCQKECGNYC 906

Human   828 LNTIIEAIEIPQFIGRSYLTYDNPDILKRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFI 892
            |||:.|:||||||.|||||||||.|||||:||||:|:|||||:|:|||||||||:||||.|||::
Zfish   907 LNTVTESIEIPQFTGRSYLTYDNRDILKRISGSRTNLFMRFKSTSKDGLLLWRGESPMRANSDYL 971

Human   893 SLGLRDGALVFSYNLGSGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQ 957
            ||||:||:|:||||||||.|::::||:|:||:||||||||||||||:|||||||:||:|||.|||
Zfish   972 SLGLQDGSLIFSYNLGSGAATVVINGTFSDGKWHRVKAVRDGQSGKLTVDDYGAQTGRSPGKMRQ 1036

Human   958 LNINGALYVGGMKEIALHTNRQYMRGLVGCISHFTLSTDYHISLVEDAVDGKNINTC 1014
            |||||.||:|||||||||||||||||||||||||||:||||:|||:|||||||||||
Zfish  1037 LNINGDLYIGGMKEIALHTNRQYMRGLVGCISHFTLATDYHLSLVDDAVDGKNINTC 1093

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EGFLAMNP_001192230.1 FN3 36..133 CDD:238020 50/106 (47%)
FN3 142..234 CDD:238020 48/91 (53%)
LamG 391..541 CDD:238058 108/149 (72%)
EGF_CA 560..602 CDD:238011 22/41 (54%)
LamG 618..765 CDD:238058 96/146 (66%)
EGF_CA <792..820 CDD:238011 16/27 (59%)
Laminin_G_2 868..993 CDD:460494 101/124 (81%)
egflamXP_073808033.1 None

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