Sequence 1: | NP_034173.1 | Gene: | Des / 13346 | MGIID: | 94885 | Length: | 469 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
Alignment Length: | 421 | Identity: | 128/421 - (30%) |
---|---|---|---|
Similarity: | 214/421 - (50%) | Gaps: | 74/421 - (17%) |
- Green bases have known domain annotations that are detailed below.
Mouse 48 SMTSRVYQVSRTSGGAGGLGSLRSSRLGTTRAPSYGAGELLDFSLADAVNQEFLATRTN---EKV 109
Mouse 110 ELQELNDRFANYIEKVRFLEQQNAALAAEVNRLK---GREPTRVAELYEEEMRELRRQVEVLTNQ 171
Mouse 172 RARVDVERDNLIDDLQRLKAKLQEEIQLREEAENN------------------------------ 206
Mouse 207 ------------LAAFRADVDAATLARIDLERRIESLNEEIAFLKKVHEEEIRELQAQLQEQQVQ 259
Mouse 260 VEMDMSK---PDLTAALRDIRAQYETIAAKNISEAEEWYKSKVSDLTQAANKNNDALRQAKQEMM 321
Mouse 322 EYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASEANGYQDNIARLEEEIRHLKDEMARHLRE 386
Mouse 387 YQDLLNVKMALDVEIATYRKLLEGEESRINL 417 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Des | NP_034173.1 | Head | 2..108 | 16/62 (26%) | |
Filament_head | 9..105 | CDD:282575 | 14/56 (25%) | ||
Filament | 106..414 | CDD:278467 | 110/358 (31%) | ||
Coil 1A | 109..140 | 16/30 (53%) | |||
Linker 1 | 141..150 | 2/11 (18%) | |||
Coil 1B | 151..251 | 33/141 (23%) | |||
Linker 12 | 252..267 | 2/17 (12%) | |||
Interaction with NEB. /evidence=ECO:0000250|UniProtKB:P17661 | 267..414 | 54/146 (37%) | |||
Coil 2A | 268..286 | 6/17 (35%) | |||
Linker 2 | 287..294 | 3/6 (50%) | |||
Coil 2B | 295..411 | 42/115 (37%) | |||
Tail | 412..469 | 3/6 (50%) | |||
Interaction with CRYAB. /evidence=ECO:0000250|UniProtKB:P17661 | 437..452 | ||||
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 110/355 (31%) |
ATP-synt_B | <67..>142 | CDD:304375 | 17/74 (23%) | ||
MreC | <178..>224 | CDD:302802 | 16/45 (36%) | ||
LTD | 473..574 | CDD:279300 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0977 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |