DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZFP42 and Zfp42

DIOPT Version :10

Sequence 1:NP_777560.2 Gene:ZFP42 / 132625 HGNCID:30949 Length:310 Species:Homo sapiens
Sequence 2:NP_033582.2 Gene:Zfp42 / 22702 MGIID:99187 Length:288 Species:Mus musculus


Alignment Length:315 Identity:166/315 - (52%)
Similarity:202/315 - (64%) Gaps:45/315 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSQQLKKRAKTRHQKGLGGRAPSGAKPRQGKSSQDLQAEIEPVSAVWALCDGYVCYEPGPQALGG 65
            |::|:||.|||..|||.||||......:|.::.......:|.....:.:.|.   .|..|:. ..
Mouse     6 MNEQMKKTAKTSGQKGPGGRALDRLTLKQDEARPVQNTRVEAPRVTYTIRDE---SEISPET-EE 66

Human    66 DDFSDCYIECVIRGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASS-LECSLEYMKKGVK- 128
            |.|.|.|:||:||||||:||||||.||:|.|.|:: .||.||::|.|||| ||.|||||.||.| 
Mouse    67 DGFPDGYLECIIRGEFSEPILEEDFLFKSFESLEE-VEQNLSRQVLEASSLLESSLEYMTKGTKQ 130

Human   129 ------KELPQKIVGENSLEYSEYMTG--KKLPPGGI-PGIDLSDPKQLAEFARKKPPINKEYDS 184
                  :|.|...||.:||     :.|  .:.|.||: .|:                        
Mouse   131 EKREVTQETPPLRVGASSL-----LAGGPAEKPEGGVYCGV------------------------ 166

Human   185 LSAIACPQSGCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKPFRCTF 249
            ||.:.|||:||.:|||::.|||||:|:||||.||||||||||.|||||||||||||||||::|||
Mouse   167 LSMLECPQAGCKKKLRDKTALRKHMLVHGPRRHVCAECGKAFTESSKLKRHFLVHTGEKPYQCTF 231

Human   250 EGCGKRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTNK 304
            ||||||||||||||||:||||||:||||||.||.:.||||||.|.||||||...|
Mouse   232 EGCGKRFSLDFNLRTHIRIHTGERRFVCPFDGCEKSFIQSNNQKIHILTHAKAGK 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZFP42NP_777560.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35 15/33 (45%)
C2H2 Zn finger 190..212 CDD:275368 14/21 (67%)
COG5048 214..>307 CDD:227381 76/91 (84%)
C2H2 Zn finger 219..239 CDD:275368 18/19 (95%)
C2H2 Zn finger 247..269 CDD:275368 20/21 (95%)
C2H2 Zn finger 277..299 CDD:275368 15/21 (71%)
Zfp42NP_033582.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48 16/41 (39%)
C2H2 Zn finger 172..194 CDD:275368 14/21 (67%)
COG5048 <198..>275 CDD:227381 66/76 (87%)
C2H2 Zn finger 201..221 CDD:275368 18/19 (95%)
C2H2 Zn finger 229..251 CDD:275368 20/21 (95%)
C2H2 Zn finger 259..281 CDD:275368 15/21 (71%)

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