Protein Alignment PABPC4L and Pabpc4l

DIOPT Version :9

• Sequence 1: NP_001108206.3
• Gene: PABPC4L / 132430
• HGNCID: 31955
• Length: 370
• Species: Homo sapiens
• Sequence 2: NP_001094949.1
• Gene: Pabpc4l / 241989
• MGIID: 3643087
• Length: 370
• Species: Mus musculus
• Alignment Length: 370
• Identity: 301/370 - (81%)
• Similarity: 334/370 - (90%)
• Gaps: 0/370 - (0%)

Human     1 MNVAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQ 65
            |::.||||.|||||||||.|||||:|||||||||||||||||||.:::||||||||||||:.|||
Mouse     1 MSLEAKYRAASLYVGDLHEDVTEDMLFRKFSTVGPVLSIRICRDLISQRSLGYAYVNFLQVNDAQ 65

Human    66 KALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVM 130
            |||.|||||:|||||||||||||||.|||||:||||||||||||||||||||||.||.|:|||||
Mouse    66 KALVTMNFDVIKGKSIRLMWSQRDACLRRSGVGNVFIKNLDKSIDNKTLYEHFSPFGTIMSSKVM 130

Human   131 SDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIK 195
            :|.:|||||.|||:|::.||||||||||||||:...:||.|||:|||||||||.|.:||||||||
Mouse   131 TDGEGSKGYGFVHYQDRRAADRAIEEMNGKLLRESTLFVARFKSRKDREAELRDKPTEFTNVYIK 195

Human   196 NFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLI 260
            |||.|:|||:|::||||||:|||||||.|::||||||||||||||||||.|||:|||:|||||.|
Mouse   196 NFGDDVDDEKLREVFSKYGQTLSVKVMKDATGKSKGFGFVSFDSHEAAKNAVEDMNGQDINGQTI 260

Human   261 FVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVM 325
            ||||||||||||||||:||||:|:||||..|..||||||||||||||.||.|||.||||.|||||
Mouse   261 FVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNLDDTIDDETLRKEFSVFGSICRVKVM 325

Human   326 QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQRH 370
            ||.|||||||||||.|||.|.|||.||||||||||||:|||.|:|
Mouse   326 QEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGSKPLNIALGQKH 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PABPC4L	NP_001108206.3	RRM	10..>369	CDD:330708	294/358 (82%)
Pabpc4l	NP_001094949.1	PABP-1234	10..>369	CDD:130689	294/358 (82%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C83972548
Domainoid	1	1.000	126	1.000	Domainoid score	I39180
eggNOG	1	0.900	-	-		E1_KOG0123
HGNC	1	1.500	-	-
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H66336
Inparanoid	1	1.050	602	1.000	Inparanoid score	I10567
Isobase	0	0.000	Not matched by this tool.
NCBI	1	1.000	-	-
OMA	1	1.010	-	-		QHG52254
OrthoDB	1	1.010	-	-		D1027234at2759
OrthoFinder	1	1.000	-	-		FOG0000294
OrthoInspector	1	1.000	-	-		oto117145
orthoMCL	1	0.900	-	-		OOG6_148628
Panther	1	1.100	-	-	LDO	PTHR24012
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R15522
SonicParanoid	1	1.000	-	-		X13119
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	18	18.340