DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCLT1 and Sclt1

DIOPT Version :9

Sequence 1:XP_016863205.1 Gene:SCLT1 / 132320 HGNCID:26406 Length:692 Species:Homo sapiens
Sequence 2:NP_001074880.1 Gene:Sclt1 / 67161 MGIID:1914411 Length:688 Species:Mus musculus


Alignment Length:692 Identity:519/692 - (75%)
Similarity:599/692 - (86%) Gaps:4/692 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAAEIDFLREQNRRLNEDFRRYQMESFSKYSSVQKAVCQGEGDDTFENLVFDQSFLAPLVTEYDK 65
            ||.|||.||:|..:||:..|::|:|...:..::|.::.:|...||..:.:.:||.|.||:.||:|
Mouse     1 MATEIDLLRDQKDKLNDILRQHQIEHIFRDPTMQNSMSKGGRGDTLVDSINEQSSLPPLIAEYEK 65

Human    66 HLGELNGQLKYYQKQVGEMKLQLENVIKENERLHSELKDAVEKKLEAFPLGTEVGTDIYADDETV 130
            ||.|||.||.||||.:||||||||.||.|||||||:|||||||:|||.|.||.:|.||.||||||
Mouse    66 HLEELNRQLTYYQKHMGEMKLQLETVITENERLHSKLKDAVEKQLEALPFGTGIGNDICADDETV 130

Human   131 RNLQEQLQLANQEKTQAVELWQTVSQELDRLHKLYQEHMTEAQIHVFESQKQKDQLFDFQQLTKQ 195
            |.|||||||||||||.|:|||||.||||..:.|||||||||||||.||::||||||.:||||||:
Mouse   131 RILQEQLQLANQEKTWALELWQTASQELQSVQKLYQEHMTEAQIHEFENRKQKDQLNNFQQLTKK 195

Human   196 LHVTNENMEVTNQQFLKTVTEQSVIIEQLRKKLRQAKLELRVAVAKVEELTNVTEDLQGQMKKKE 260
            |||.|||:|:||..||||||||::.||:|||.||||:|:|||||:||||||.|||.||.||.|||
Mouse   196 LHVANENIEMTNHHFLKTVTEQNMEIEKLRKHLRQARLDLRVAVSKVEELTKVTEGLQEQMLKKE 260

Human   261 KDVVSAHGREEASDRRLQQLQSSIKQLEIRLCVTIQEANQLRTENTHLEKQTRELQAKCNELENE 325
            :|::||.|:|||||||:|||||||||||.||||.|:||:.|:|..::||||.:||||||:|.|||
Mouse   261 EDIMSAQGKEEASDRRVQQLQSSIKQLESRLCVAIEEADVLKTGKSNLEKQIKELQAKCSESENE 325

Human   326 RYEAIVRARNSMQLLEEANLQKSQALLEEKQKEEDIEKMKETVSRFVQDATIRTKKEVANTKKQC 390
            :||||.|||:|||||||||::::|.||||||||.|.||||:|:|:.:|||.|:.:|||.:||||.
Mouse   326 KYEAISRARDSMQLLEEANIKQNQILLEEKQKEVDREKMKKTMSQLIQDAAIKARKEVESTKKQY 390

Human   391 NIQISRLTEELSALQMECAEKQGQIERVIKEKKAVEEELEKPFLQIYREGRGNESDYRKLEEMHQ 455
            .|.||:|.||||.|||:|.||||||:|.|:.|:||||||||    |||||:.:||||||||||||
Mouse   391 EILISQLKEELSTLQMDCDEKQGQIDRAIRGKRAVEEELEK----IYREGKQDESDYRKLEEMHQ 451

Human   456 RFLVSERSKDDLQLRLTRAENRIKQLETDSSEEISRYQEMIQKLQNVLESERENCGLVSEQRLKL 520
            |.|.:|||||||||||..|||||||||.:||||:||..|||||||.||||||||||.||||||||
Mouse   452 RCLAAERSKDDLQLRLKSAENRIKQLEINSSEEMSRSHEMIQKLQTVLESERENCGFVSEQRLKL 516

Human   521 QQENKQLRKETESLRKIALEAQKKAKVKISTMEHEFSIKERGFEVQLREMEDSNRNSIVELRHLL 585
            ||||:||:||||.|||:|||||||||:|:|||||:|||||.||||||||||||||||||||||||
Mouse   517 QQENEQLQKETEDLRKVALEAQKKAKLKVSTMEHQFSIKEHGFEVQLREMEDSNRNSIVELRHLL 581

Human   586 ATQQKAANRWKEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQE 650
            |.|||.||||||||||||||||:||::||||||||||||||||||||||||||||||||||||||
Mouse   582 AAQQKTANRWKEETKKLTESAEMRISSLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQE 646

Human   651 KANRLQRRLSQAEERAASASQQLSVITVQRRKAASLMNLENI 692
            |||||||||||||||||||||||||||||||||||:||||||
Mouse   647 KANRLQRRLSQAEERAASASQQLSVITVQRRKAASMMNLENI 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCLT1XP_016863205.1 None
Sclt1NP_001074880.1 Smc 180..>509 CDD:224117 239/332 (72%)
SMC_prok_B <378..671 CDD:274008 246/296 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83964419
Domainoid 1 1.000 992 1.000 Domainoid score I1723
eggNOG 1 0.900 - - E1_28JSI
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H27031
Inparanoid 1 1.050 993 1.000 Inparanoid score I5860
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG43598
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0010413
OrthoInspector 1 1.000 - - oto120835
orthoMCL 1 0.900 - - OOG6_109910
Panther 1 1.100 - - LDO PTHR35970
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7857
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1717.260

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