DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc6a3 and CG15279

DIOPT Version :9

Sequence 1:NP_034150.1 Gene:Slc6a3 / 13162 MGIID:94862 Length:619 Species:Mus musculus
Sequence 2:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster


Alignment Length:583 Identity:203/583 - (34%)
Similarity:321/583 - (55%) Gaps:36/583 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse    43 TNSTLINPPQTPVEV----QERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYL 103
            |||..:.......|.    :||.||.|.::||:|.|..:|.|.||||||:....|||||||:|||
  Fly    29 TNSPALRDNSDDQEAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYL 93

Mouse   104 LFMVIAGMPLFYMELALGQFNREGAAGVWKICPVLKGVG----FTVILISFYVGFFYNVIIAWAL 164
            :.:.:.|.|::|:|:.:|||:..|:..|:.:||.:||||    |.|.::|.|    |..::|...
  Fly    94 IVLFLIGKPIYYLEMVIGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTY----YAALVAIIG 154

Mouse   165 HYFFSSFTMDLPWIHCNNTW------NSPNCSDAHSSNSSDGLGLNDTFGT------TPAAEYFE 217
            .||..||...|||..|...|      ::|:.|:.....|:|....|.|..:      |.:..||.
  Fly   155 RYFIESFRNPLPWSTCRAEWGIHCINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFV 219

Mouse   218 RGVLHLHQSRGIDD-LGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLL 281
            :.|  ||:...|:: :|.|.|:|...|.:....::|.:.:|||:|||..:..|..|||::..||:
  Fly   220 KEV--LHEKPNIEEGIGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLV 282

Mouse   282 RGVTLPGAMDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAI 346
            |.|||||::|||..::...:.::.:..||..|.||..:||.|.||.:|.:||:|||.:|.:|||.
  Fly   283 RAVTLPGSIDGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAA 347

Mouse   347 ITTSINSLTSFSSGFVVFSFLGYMAQKHNVPIRDVAT---DGPGLIFIIYPEAIATLP-LSSAWA 407
            |.|.::::||..:||.:|..||::|  |.:...|:.:   .|.||.||.||:|||... |...::
  Fly   348 IVTGLDTMTSLLAGFTIFGILGHLA--HEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFS 410

Mouse   408 AVFFLMLLTLGIDSAMGGMESVITGLVDEFQLLHRHRELFTLGIVLATFLLSLFCVTNGGIYVFT 472
            .:|||||..|||.|.:......:|.:.|.|....:.:  .:|.|.:.:|.:.|..:|.||.|:.|
  Fly   411 VLFFLMLFVLGIGSNIAMTSCSVTAIRDRFPNFGQWQ--CSLLIAVVSFFIGLMYITPGGQYMLT 473

Mouse   473 LLDHFAAGTSILFGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVV 537
            |:|.|.|....|...:.|...:.|.||..:...||:.|.|::..|||||||.:::|..:..:::.
  Fly   474 LVDFFGASMIALVLGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIY 538

Mouse   538 SIVTFRPPHYGAYIFPDWANALGWIIATSSMAMVPIYATYKFCSLPG-SFREKLAYAITPEKD 599
            ...|::|..|...::|:|:.::||:|....:..:||:........|| :...|:..|.||:|:
  Fly   539 FYATYQPLTYNNIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLGAKIRGAFTPKKN 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a3NP_034150.1 SLC5-6-like_sbd 60..613 CDD:294310 198/562 (35%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 7/29 (24%)
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 195/557 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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