DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc6a3 and ine

DIOPT Version :9

Sequence 1:NP_034150.1 Gene:Slc6a3 / 13162 MGIID:94862 Length:619 Species:Mus musculus
Sequence 2:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster


Alignment Length:581 Identity:231/581 - (39%)
Similarity:360/581 - (61%) Gaps:41/581 - (7%)


- Green bases have known domain annotations that are detailed below.


Mouse    47 LINPPQTP------------------VEVQERET-WSKKIDFLLSVIGFAVDLANVWRFPYLCYK 92
            ::| ||||                  .:::.|:. |:.|:.|:|:.||::|.|.|||||||:|||
  Fly   306 MVN-PQTPPPLGVDDDDSYLDMSDETAQLKPRQQHWANKMQFVLACIGYSVGLGNVWRFPYMCYK 369

Mouse    93 NGGGAFLVPYLLFMVIAGMPLFYMELALGQFNREGAAG-VWKICPVLKGVGFTVILISFYVGFFY 156
            :|||.|||||.:.:.|..:||.:|||::||:...|..| :.::||:.||.|...:::||.:..:|
  Fly   370 SGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALGQLCPLFKGAGLASVVVSFLMSTYY 434

Mouse   157 NVIIAWALHYFFSSFTMDLPWIHCNNTWNSPNCSDAHSSNSSDGLGLN----DTFGTTPAAEYFE 217
            :|||.::::|||:||..::|||.|||.||:|:|......      |:|    || ..||:.|:||
  Fly   435 SVIIGYSIYYFFTSFKTEMPWIDCNNRWNTPDCWVPQRK------GINASAPDT-SRTPSEEFFE 492

Mouse   218 RGVLHLHQSRGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLR 282
            ..||.:  |.|::..|..||:|.|||:...:::||:.||.:|:|.||.:.|||.|:|::..|::|
  Fly   493 NKVLQI--SGGLEYPGMMRWELFACLICAWLMVYFATWKSIKSSAKVRYFTATFPFVLIIILMVR 555

Mouse   283 GVTLPGAMDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAII 347
            .|||.||.:|:|.:....:..|..|:|||:||:|...|||:.||.:|:|:||||:.||..||.:.
  Fly   556 AVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGITFGSMISFASYNKYNNNILRDTVA 620

Mouse   348 TTSINSLTSFSSGFVVFSFLGYMAQKHNVPIRDVATDGPGLIFIIYPEAIATLPLSSAWAAVFFL 412
            .:::|.:||...|...||.||.:|.:.|..:|||..||||:||::||:|:|.:|.:..||.:||.
  Fly   621 VSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMIFVVYPQAMAKMPYAQLWAVMFFF 685

Mouse   413 MLLTLGIDSAMGGMESVITGLVDEF-QLLHRH---RELFTLGIVLATFLLSLFCVTNGGIYVFTL 473
            |||.||::|....:|.|:|.:.|.| :.:.||   .|:..|.:.:.:.|..:..:..||||.|.|
  Fly   686 MLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLFVCVISCLFGMPNIIQGGIYYFQL 750

Mouse   474 LDHFAAGTSILFGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVS 538
            :||:||..:|:|....:.|.:|||||..:.|.::|||||:.|:.|.|.||.::.||.|..:.|:|
  Fly   751 MDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAPSFYLRSCWLVLGPCLLFAIWVLS 815

Mouse   539 IVTFRPP--HYGAYIFPDWANALGWIIATSSMAMVPIYATYKFCSLPG-SFREKLAYAITP 596
            ::.:..|  |.|.|.:||||..:||:.|:.|:..:|.||...|....| :|.|::...:.|
  Fly   816 LINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVINFLRSSGDTFWERIRNTLRP 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a3NP_034150.1 SLC5-6-like_sbd 60..613 CDD:294310 226/550 (41%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 10/29 (34%)
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 224/547 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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