DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp4p1

DIOPT Version :9

Sequence 1:NP_031849.1 Gene:Cyp4b1 / 13120 MGIID:103225 Length:511 Species:Mus musculus
Sequence 2:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster


Alignment Length:538 Identity:148/538 - (27%)
Similarity:248/538 - (46%) Gaps:82/538 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 LWASVVILMVTVLKLLSLLFRRQKLARALDSF-------PGPPKH---------WLFGHALEIQK 63
            ||     |::.:..||..|.|..|....|..|       .|.|..         .:||:.|::. 
  Fly     4 LW-----LILALSALLYWLHRANKDYHILSFFTKRIRLKDGTPVEIIAPIAKGKTIFGNTLDLY- 62

Mouse    64 TGGLDKVVTWTEQFPYAHPLWLGQFIVFLNIYEPDYAKAVYSRGDPKAA-------------YVY 115
              |.|....:......|..:.. .:|.::      :.||:|:..|..:|             .||
  Fly    63 --GRDHAGVFNYSRERAKEMGT-SYIEYV------FGKAIYNIIDADSAENVLNHPNLITKGLVY 118

Mouse   116 DFFLQWIGKGLLVLEGPKWFQHRKLLTPGFHYDVLKPYVAIFAESTRVMLDKWEKKASENKSFDI 180
            :|...::..|||...|.||...||:|||.||:::|..:..||...::..|.::|  ..:..:..:
  Fly   119 NFLHPFLRTGLLTSTGKKWHARRKMLTPTFHFNILNQFQEIFKTESQKFLLQFE--GQDEVTITL 181

Mouse   181 FCDVGHMALDTLMKCTFG--------KGD---SGLSHSDNSYYLAVSDLTLLMQQRIDSFQYHND 234
            ...:....|:::.:...|        |||   ...|..:..:...:|:..|...:..:.|.    
  Fly   182 HDVIPRFTLNSICETAMGVKLDEMAEKGDRYRENFSQIEECFIRRLSNPLLWGDKLFEMFA---- 242

Mouse   235 FIYWLTPHGRRFLRACQIAHDHTDHVIRQRKAALQDEKEQKK-------LQERRHLDFLDILLGA 292
                    .:.|..|..:.|..:..:|.:|:..|:||.::..       ...::....||.|:.|
  Fly   243 --------AKDFASALDVVHRFSSEIIAKRRDLLKDELDKSSSTADDDGFVSKKRFAMLDTLIYA 299

Mouse   293 RDESGIKLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPMHQQRCREEVRE-ILGDRDSFQ 356
             ::.|: :....:..||||.||||:|||:.|:.:.|..|:|.|..|:.|.:|::| |..|..:..
  Fly   300 -EKDGL-IDHIGICEEVDTLMFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHIDDDLSNLD 362

Mouse   357 WDDLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPD 421
            ...|.::.||...|||..||:|.||.:.|:..:.....:|..||.|:.|::|::.:|||:..|..
  Fly   363 VGQLNKLKYLEYFMKETTRLFPSVPIMGREAVQETELANGLILPKGAQITIHVFDIHRNAKYWDS 427

Mouse   422 PEVFDPLRFSPENMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEF--SPDPSKIP 484
            ||.|.|.||.|||:..||.:|::|||||.|||||:::||.|||.:..:.|.:|:.  :.||.||.
  Fly   428 PEEFRPERFLPENVQDRHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQFKVLKAIDPQKIV 492

Mouse   485 IKVPQLILRSKNGIHLYL 502
            ... .:.||:::.|.:.|
  Fly   493 FHT-GITLRTQDKIRVKL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_031849.1 p450 47..500 CDD:278495 137/495 (28%)
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 135/481 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845352
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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