DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp4d8

DIOPT Version :9

Sequence 1:NP_031849.1 Gene:Cyp4b1 / 13120 MGIID:103225 Length:511 Species:Mus musculus
Sequence 2:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster


Alignment Length:543 Identity:164/543 - (30%)
Similarity:265/543 - (48%) Gaps:116/543 - (21%)


- Green bases have known domain annotations that are detailed below.


Mouse    29 LLSLLF------------RRQKLARALDSFPGP----------------PK-------------- 51
            |:.|||            ||:|:|    :.|||                ||              
  Fly     6 LVVLLFGAGWIIHLGQADRRRKVA----NLPGPICPPLIGAMQLMLRLNPKTFIKVGREYVLKFG 66

Mouse    52 H----WLFGHALEIQKTGGLDKVVTWTEQFPYAHPLWLGQFIVFLNIYEPDYAKAVYSRGDPKAA 112
            |    |:|...|.:.....|::.:..:::....||                              
  Fly    67 HLQRVWIFNRLLIMSGDAELNEQLLSSQEHLVKHP------------------------------ 101

Mouse   113 YVYDFFLQWIGKGLLVLEGPKWFQHRKLLTPGFHYDVLKPYVAIFAESTRVMLDKWEKKASENKS 177
             ||....||:|.|||:.:|..|.|.||::||.||:.:|:.:|.:|.:.:.:.:.:..:||:.| :
  Fly   102 -VYKVLGQWLGNGLLLSDGKVWHQRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQKANGN-T 164

Mouse   178 FDIFCDVGHMALDTLMKCTFGKGDSGLSHSDNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWLT-P 241
            ||::..:...|||.:.:...|......::....|..||::.|.|:..|..|.....:.::.|| |
  Fly   165 FDVYRSICAAALDIIAETAMGTKIYAQANESTPYAEAVNECTALLSWRFMSVYLQVELLFTLTHP 229

Mouse   242 HGR----RFLRACQIAHDHTDHVIRQRKAALQDEKEQKKLQE--------RRHLDFLDILLGARD 294
            |.:    :.:|..|   :.|..||.:|:.||:|  :|.||.:        :|.:..||:||.:..
  Fly   230 HLKWRQTQLIRTMQ---EFTIKVIEKRRQALED--QQSKLMDTADEDVGSKRRMALLDVLLMSTV 289

Mouse   295 ESGIKLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPMHQQRCREEVREILG-DRD---SF 355
            : |..|::.::|.|||||||||||||||.:|:.|:.::.:|..|.:..||:.::|| ||.   |.
  Fly   290 D-GRPLTNDEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSI 353

Mouse   356 QWDDLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFV-----DGRSLPAGSLISLHIYALHRN 415
            :  ||.::.|:...:||..|:|||||.|.|:|.....:.     || .:||||.|.:.|:.:||.
  Fly   354 R--DLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDG-VIPAGSEIIIGIFGVHRQ 415

Mouse   416 SAVWPDPEVFDPLRFSPENMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSPDP 480
            ...:|:|:.|.|.|.  ||.:...||..:||||||||||||:||..|||::.|..:..:|..|..
  Fly   416 PETFPNPDEFIPERH--ENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLPMG 478

Mouse   481 SKIPIKVPQLILRSKNGIHLYLK 503
            .::.. :..::|||:.|..|.::
  Fly   479 QRVEC-IVNIVLRSETGFQLGMR 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_031849.1 p450 47..500 CDD:278495 155/508 (31%)
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 150/474 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845251
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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