DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp4d20

DIOPT Version :9

Sequence 1:NP_031849.1 Gene:Cyp4b1 / 13120 MGIID:103225 Length:511 Species:Mus musculus
Sequence 2:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster


Alignment Length:529 Identity:171/529 - (32%)
Similarity:267/529 - (50%) Gaps:63/529 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 LWASVVILMVTVLKLLSLLFRRQK---LARALDSFPGPPKHWLFGHALEIQKTGGLDKVVTWT-- 74
            :|  :.::...::.||:..|.|::   ||....:.|||....:.|..|:....|. :.::.|.  
  Fly     1 MW--LTLITGALILLLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGA-ENIIGWVGE 62

Mouse    75 --EQFPYAHPLW-LGQFIVFLNIYEPDYAKAVYS------RGDPKAAYVYDFFLQWIGKGLLVLE 130
              :::......| ||:.:::..  :..|.:.:.|      :|.     :|::...::..||||..
  Fly    63 KFDKYGKTFRFWILGESLIYTK--DLQYFETILSSTTLLEKGQ-----LYEYLRPFLNDGLLVST 120

Mouse   131 GPKWFQHRKLLTPGFHYDVLKPYVAIFAESTRVMLDKWEKKASENKSFDIFCDVGHMALDTLMKC 195
            |.||...||:.|..||:.||:.||.|....:.||:|...|.|....:.|:...|...|||.:.:.
  Fly   121 GRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVITEA 185

Mouse   196 TFGKGDSGLSHSDNSYYLAVSDLTLLMQQRIDSF--QYHNDFIYWLTP------HGRRFLRACQI 252
            ..|...:..:..|..|..|:..:..:...|:..|  :|:     ||.|      | |:.|...::
  Fly   186 AMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYN-----WLFPLAAPLLH-RQLLSDIRV 244

Mouse   253 AHDHTDHVIRQRKAALQDEKE----------QKKLQERRHLDFLDILLGARDESGIK---LSDAD 304
            .||.||.||.:|:..::..|.          ..::..:..:..|||||    :|.|.   |||||
  Fly   245 MHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILL----QSSINNQPLSDAD 305

Mouse   305 LRAEVDTFMFEGHDTTTSGISWFLYCMALYPMHQQRCREEVREILGDRDS--FQWDDLAQMTYLT 367
            :|.|||||||||.|||:||:|..||.:|.:|..|||..||::.:||...|  .....|..:.||.
  Fly   306 IREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLD 370

Mouse   368 MCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPEVFDPLRFSP 432
            ..:||..|||||||.:.|...|.:...| :::||.:.|.|.:|..||::..:|||..|.|.||..
  Fly   371 CVIKETMRLYPPVPAIGRHAQKELEIGD-KTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLE 434

Mouse   433 ENMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSPDPSKIPIKVPQL--ILRSK 495
            :...|.:.||::||||||:|||||:||:.||||:.:..|..:|..|...::.   |.|  ||||.
  Fly   435 DQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEELK---PMLNFILRSA 496

Mouse   496 NGIHLYLKP 504
            :||::.|:|
  Fly   497 SGINVGLRP 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_031849.1 p450 47..500 CDD:278495 162/488 (33%)
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 156/480 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845258
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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